RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 C1orf123Q9NWV4 160 aa7.61□□□□□ -1.19
SMC1A-203ENST00000428014 UBAP1Q9NZ09 502 aa7.61□□□□□ -1.19
SMC1A-203ENST00000428014 KPTNQ9Y664 436 aa7.61□□□□□ -1.19
SMC1A-203ENST00000428014 FBN1P35555 2871 aaKnown RBP7.6□□□□□ -1.19
SMC1A-203ENST00000428014 LOC105371242A0A075B767 164 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 TRBV23-1A0A0A0MS06 115 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 A0A1B0GVI7 797 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 PQLC2LA1A4F0 135 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 A6NLC8 198 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 TMEM212A6NML5 194 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 ZNF850A8MQ14 1090 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 TRAPPC2LH3BP13 241 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 J3QT63 122 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 P2RY10O00398 339 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 CDIPTO14735 213 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 ENTPD6O75354 484 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 PLATP00750 562 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 MRPL3P09001 348 aaKnown RBP7.6□□□□□ -1.19
SMC1A-203ENST00000428014 CCDC159P0C7I6 412 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 DBTP11182 482 aaKnown RBP7.6□□□□□ -1.19
SMC1A-203ENST00000428014 PIPP12273 146 aaPredicted RBP7.6□□□□□ -1.19
SMC1A-203ENST00000428014 FUT6P51993 359 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 ZNF85Q03923 595 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 ZNF91Q05481 1191 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 PDCD1Q15116 288 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 OGFRL1Q5TC84 451 aaPredicted RBP7.6□□□□□ -1.19
SMC1A-203ENST00000428014 PRAMEF6Q5VXH4 476 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 ZNF788Q6ZQV5 615 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 CALHM1Q8IU99 346 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 YIPF7Q8N8F6 280 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 POC1AQ8NBT0 407 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 SCCPDHQ8NBX0 429 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 OR10H4Q8NGA5 316 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 OR2G2Q8NGZ5 317 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 ANGPTL6Q8NI99 470 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 RPS4Y2Q8TD47 263 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 AQP3Q92482 292 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 DVL3Q92997 716 aaPredicted RBP7.6□□□□□ -1.19
SMC1A-203ENST00000428014 SDSLQ96GA7 329 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 ZNF649Q9BS31 505 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 FAM234AQ9H0X4 552 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 VCXQ9H320 206 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 NARFLQ9H6Q4 476 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 HES4Q9HCC6 221 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 UFSP2Q9NUQ7 469 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 NUP50Q9UKX7 468 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 PIGLQ9Y2B2 252 aa7.6□□□□□ -1.19
SMC1A-203ENST00000428014 DAPL1A0PJW8 107 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 ANKRD61A6NGH8 418 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 ZNF879B4DU55 563 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 SIGLEC5O15389 551 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 PHF1O43189 567 aaPredicted RBP7.59□□□□□ -1.19
SMC1A-203ENST00000428014 SYT7O43581 403 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 GRPP07492 148 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 PGA5P0DJD9 388 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 EPHA1P21709 976 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 PRKACBP22694 351 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 CD80P33681 288 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 COMPP49747 757 aaPredicted RBP7.59□□□□□ -1.19
SMC1A-203ENST00000428014 HCCSP53701 268 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 ERVK11-1P61568 191 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 IL13RA1P78552 427 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 LCN2P80188 198 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 TNP2Q05952 138 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 MFGE8Q08431 387 aaPredicted RBP7.59□□□□□ -1.19
SMC1A-203ENST00000428014 MED21Q13503 144 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 RIPK1Q13546 671 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 CNN3Q15417 329 aaKnown RBP7.59□□□□□ -1.19
SMC1A-203ENST00000428014 SMIM21Q3B7S5 101 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 LRRC10Q5BKY1 277 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 ZNF691Q5VV52 312 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 RNLSQ5VYX0 342 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 TREML4Q6UXN2 200 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 SSX6Q7RTT6 188 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 BCDIN3DQ7Z5W3 292 aaKnown RBP7.59□□□□□ -1.19
SMC1A-203ENST00000428014 TMEM86BQ8N661 226 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 FAM216AQ8WUB2 273 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 FBLIM1Q8WUP2 373 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 LRRC29Q8WV35 223 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 PIGCQ92535 297 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 THRSPQ92748 146 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 LGALS12Q96DT0 336 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 RNFT2Q96EX2 444 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 CPNE2Q96FN4 548 aaPredicted RBP7.59□□□□□ -1.19
SMC1A-203ENST00000428014 NRIP2Q9BQI9 281 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 NUDT16L1Q9BRJ7 211 aaKnown RBP7.59□□□□□ -1.19
SMC1A-203ENST00000428014 ADI1Q9BV57 179 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 BRD7Q9NPI1 651 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 PLCXD1Q9NUJ7 323 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 CNOT2Q9NZN8 540 aaKnown RBP7.59□□□□□ -1.19
SMC1A-203ENST00000428014 NLKQ9UBE8 527 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 ZNF222Q9UK12 451 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 HHLA2Q9UM44 414 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 SLC7A11Q9UPY5 501 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 CAB39Q9Y376 341 aaPredicted RBP7.59□□□□□ -1.19
SMC1A-203ENST00000428014 ARHGAP32A7KAX9 2087 aa7.59□□□□□ -1.19
SMC1A-203ENST00000428014 hCG_1807616A0A1W2PRN6 198 aa7.58□□□□□ -1.2
SMC1A-203ENST00000428014 NKX6-3A6NJ46 265 aa7.58□□□□□ -1.2
SMC1A-203ENST00000428014 OR4C45A6NMZ5 311 aa7.58□□□□□ -1.2
SMC1A-203ENST00000428014 ZNF732B4DXR9 585 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms