RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 DNASE2O00115 360 aaPredicted RBP1.42□□□□□ -2.18
PTPRC-208ENST00000427110 GABRPO00591 440 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 BPY2O14599 106 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 POLR3GO15318 223 aaPredicted RBP1.42□□□□□ -2.18
PTPRC-208ENST00000427110 RBBP9O75884 186 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 YIF1AO95070 293 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 HPRT1P00492 218 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 IFNW1P05000 195 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 KRT16P08779 473 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 CLTAP09496 248 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 OR8U9P0C7N5 309 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 ZNF688P0C7X2 276 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 POLR2MP0CAP2 368 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 ANXA8P13928 327 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 ATF6P18850 670 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 GSTM3P21266 225 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 RPS12P25398 132 aaKnown RBP1.42□□□□□ -2.18
PTPRC-208ENST00000427110 GTF2H1P32780 548 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 OPRK1P41145 380 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 SLC11A1P49279 550 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 UBE2MP61081 183 aaKnown RBP1.42□□□□□ -2.18
PTPRC-208ENST00000427110 TNNC1P63316 161 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 PRR3P79522 188 aaKnown RBP1.42□□□□□ -2.18
PTPRC-208ENST00000427110 SEMG2Q02383 582 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 CYP24A1Q07973 514 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 C2orf54Q08AI8 447 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 MOBPQ13875 183 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 CHRFAM7AQ494W8 412 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 HSP90B2PQ58FF3 399 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 TNFAIP8L3Q5GJ75 292 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 C1orf185Q5T7R7 199 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 ANXA8L1Q5VT79 327 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 Q5W150 140 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 DUPD1Q68J44 220 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 C8orf74Q6P047 294 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 SLC25A34Q6PIV7 304 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 TMEM220Q6QAJ8 160 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 CROCCP2Q86T23 111 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 NT5DC3Q86UY8 548 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 CBLN2Q8IUK8 224 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 ZNF547Q8IVP9 402 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 CDKL3Q8IVW4 592 aaPredicted RBP1.42□□□□□ -2.18
PTPRC-208ENST00000427110 NELFCDQ8IXH7 590 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 RNF182Q8N6D2 247 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 ZNF615Q8N8J6 731 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 GPR26Q8NDV2 337 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 BPIFCQ8NFQ6 507 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 OR9A2Q8NGT5 310 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 LILRB4Q8NHJ6 448 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 LRRC45Q96CN5 670 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 NRBF2Q96F24 287 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 CAPZA3Q96KX2 299 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 COL21A1Q96P44 957 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 ZNF317Q96PQ6 595 aaPredicted RBP1.42□□□□□ -2.18
PTPRC-208ENST00000427110 TBL1YQ9BQ87 522 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 MTG1Q9BT17 334 aaPredicted RBP1.42□□□□□ -2.18
PTPRC-208ENST00000427110 TMEM109Q9BVC6 243 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 ANKRD60Q9BZ19 345 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 OR52D1Q9H346 318 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 TDRD3Q9H7E2 651 aaKnown RBP1.42□□□□□ -2.18
PTPRC-208ENST00000427110 AUNIPQ9H7T9 357 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 NTN4Q9HB63 628 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 TMEM27Q9HBJ8 222 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 TMBIM4Q9HC24 238 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 ACP6Q9NPH0 428 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 AGPAT3Q9NRZ7 376 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 MYEF2Q9P2K5 600 aaKnown RBP1.42□□□□□ -2.18
PTPRC-208ENST00000427110 GGA2Q9UJY4 613 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 DNAJC12Q9UKB3 198 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 TBC1D24Q9ULP9 559 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 PLXNB2O15031 1838 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 SCN4AP35499 1836 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 SCN1AP35498 2009 aa1.42□□□□□ -2.18
PTPRC-208ENST00000427110 TRPM7Q96QT4 1865 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 MYO18AQ92614 2054 aaKnown RBP1.41□□□□□ -2.18
PTPRC-208ENST00000427110 TSC2P49815 1807 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 DOCK3Q8IZD9 2030 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 IGLV2-18A0A075B6J9 118 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 TRAV40A0A0B4J280 105 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 IGHV1-69DA0A0B4J2H0 117 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 A0A0J9YXV3 536 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 A0A0U1RQV1 116 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 C5orf63A6NC05 138 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 ZNF233A6NK53 670 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 NDUFC2-KCTD14E9PQ53 114 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 PGRMC1O00264 195 aaKnown RBP1.41□□□□□ -2.18
PTPRC-208ENST00000427110 PLPP1O14494 284 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 RRP8O43159 456 aaKnown RBP1.41□□□□□ -2.18
PTPRC-208ENST00000427110 CACNG3O60359 315 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 REM1O75628 298 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 FCN3O75636 299 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 CCNKO75909 580 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 AQP8O94778 261 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 RCBTB2O95199 551 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 MPZL1O95297 269 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 CD160O95971 181 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 CCNE2O96020 404 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 HLA-HP01893 362 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 HLA-DQA1P01909 254 aa1.41□□□□□ -2.18
PTPRC-208ENST00000427110 HLA-DQB1P01920 261 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms