RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ZBTB37Q5TC79 503 aa11.31□□□□□ -0.6
SNX3-204ENST00000426155 TMEM42Q69YG0 159 aa11.31□□□□□ -0.6
SNX3-204ENST00000426155 STUMQ69YW2 141 aa11.31□□□□□ -0.6
SNX3-204ENST00000426155 HAGHLQ6PII5 290 aaPredicted RBP11.31□□□□□ -0.6
SNX3-204ENST00000426155 DOK3Q7L591 496 aa11.31□□□□□ -0.6
SNX3-204ENST00000426155 NANPQ8TBE9 248 aa11.31□□□□□ -0.6
SNX3-204ENST00000426155 NPRL2Q8WTW4 380 aa11.31□□□□□ -0.6
SNX3-204ENST00000426155 RAB40AQ8WXH6 277 aa11.31□□□□□ -0.6
SNX3-204ENST00000426155 C4orf36Q96KX1 117 aa11.31□□□□□ -0.6
SNX3-204ENST00000426155 ZNF488Q96MN9 340 aa11.31□□□□□ -0.6
SNX3-204ENST00000426155 TSC22D3Q99576 134 aa11.31□□□□□ -0.6
SNX3-204ENST00000426155 NUDT16L1Q9BRJ7 211 aaKnown RBP11.31□□□□□ -0.6
SNX3-204ENST00000426155 MRI1Q9BV20 369 aa11.31□□□□□ -0.6
SNX3-204ENST00000426155 ERVK-18Q9QC07 812 aa11.31□□□□□ -0.6
SNX3-204ENST00000426155 SCOCQ9UIL1 159 aa11.31□□□□□ -0.6
SNX3-204ENST00000426155 SOX21Q9Y651 276 aaPredicted RBP11.31□□□□□ -0.6
SNX3-204ENST00000426155 A0A1B0GVI7 797 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 LOC107986453A0A1B0GWG9 222 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 J3QLW9 94 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 SLC16A6O15403 523 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 SYT7O43581 403 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 SYNGR1O43759 233 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 WBP4O75554 376 aaKnown RBP11.3□□□□□ -0.6
SNX3-204ENST00000426155 IGHV4-38-2P0DP08 117 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 ZNF19P17023 458 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 CFHR2P36980 270 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 SLC34A1Q06495 639 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 IKZF1Q13422 519 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 MICBQ29980 383 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 CLVS2Q5SYC1 327 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 BTNL3Q6UXE8 466 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 Q6ZSR3 168 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 LHFPL3Q86UP9 236 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 BCL6BQ8N143 479 aaPredicted RBP11.3□□□□□ -0.6
SNX3-204ENST00000426155 ZNF555Q8NEP9 628 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 OR5A2Q8NGI9 324 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 OR10Z1Q8NGY1 313 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 OR2G2Q8NGZ5 317 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 OR10AC1Q8NH08 325 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 CNIH3Q8TBE1 160 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 TRMT10AQ8TBZ6 339 aaKnown RBP11.3□□□□□ -0.6
SNX3-204ENST00000426155 CYGBQ8WWM9 190 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 ST8SIA4Q92187 359 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 AQP3Q92482 292 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 PELI1Q96FA3 418 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 ALG8Q9BVK2 526 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 ISG20L2Q9H9L3 353 aaKnown RBP11.3□□□□□ -0.6
SNX3-204ENST00000426155 TRIM36Q9NQ86 728 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 DNAJB11Q9UBS4 358 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 ZNF69Q9UC07 566 aa11.3□□□□□ -0.6
SNX3-204ENST00000426155 TRAV40A0A0B4J280 105 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 KIR2DS1A0A191URI9 304 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 MAGEA13PA6NCF6 341 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 OR5B21A6NL26 309 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 MPZL2O60487 215 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 MUC1P15941 1255 aaPredicted RBP11.29□□□□□ -0.6
SNX3-204ENST00000426155 GLRA1P23415 457 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 CPT2P23786 658 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 FGF12P61328 243 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 ZNF691Q5VV52 312 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 ACBD7Q8N6N7 88 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 OR52I1Q8NGK6 324 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 TMEM158Q8WZ71 300 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 GAFA1Q96PS6 74 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 ZNF649Q9BS31 505 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 C19orf24Q9BVV8 132 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 FAM192AQ9GZU8 254 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 PLEKHA1Q9HB21 404 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 FRRS1LQ9P0K9 344 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 KAAG1Q9UBP8 84 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 STAB1Q9NY15 2570 aa11.29□□□□□ -0.6
SNX3-204ENST00000426155 FAM230AA0A1W2PPH8 454 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 PQLC2LA1A4F0 135 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 ANKRD61A6NGH8 418 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 SNTNA6NMZ2 147 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 NDUFA2O43678 99 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 ENSAO43768 121 aaKnown RBP11.28□□□□□ -0.6
SNX3-204ENST00000426155 IGHA1P01876 353 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 SFTPBP07988 381 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 HTR1AP08908 422 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 UBCP0CG48 685 aaKnown RBP11.28□□□□□ -0.6
SNX3-204ENST00000426155 HAAOP46952 286 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 NPY4RP50391 375 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 UBE2V2Q15819 145 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 DGUOKQ16854 277 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 BTN2A1Q7KYR7 527 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 ANGPTL5Q86XS5 388 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 CALHM1Q8IU99 346 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 BPIFB2Q8N4F0 458 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 TEX29Q8N6K0 151 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.28□□□□□ -0.6
SNX3-204ENST00000426155 OR51A4Q8NGJ6 313 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 ANGPTL6Q8NI99 470 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 ZFAND2BQ8WV99 257 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 Q96MT0 163 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 RDH12Q96NR8 316 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 NR1H4Q96RI1 486 aaPredicted RBP11.28□□□□□ -0.6
SNX3-204ENST00000426155 PCGF1Q9BSM1 259 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 VCX3BQ9H321 246 aa11.28□□□□□ -0.6
SNX3-204ENST00000426155 ELL3Q9HB65 397 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms