RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 ZNF707Q96C28 371 aaPredicted RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 ROPN1LQ96C74 230 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 ERMAPQ96PL5 475 aaPredicted RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 OR2M2Q96R28 347 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 CNN2Q99439 309 aaKnown RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 TSNAXQ99598 290 aaKnown RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 EBNA1BP2Q99848 306 aaKnown RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 KCNS3Q9BQ31 491 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 ACBD6Q9BR61 282 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 ZNF2Q9BSG1 426 aaPredicted RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 DDA1Q9BW61 102 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 TAPBPLQ9BX59 468 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 SUCNR1Q9BXA5 334 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 GABARAPL1Q9H0R8 117 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 METTL8Q9H825 291 aaKnown RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 ABCB9Q9NP78 766 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 CCNB1IP1Q9NPC3 277 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 TAS2R3Q9NYW6 316 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 PIPOXQ9P0Z9 390 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 GCNT4Q9P109 453 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 CRCT1Q9UGL9 99 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 CHRNA9Q9UGM1 479 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 CD84Q9UIB8 345 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 MRTO4Q9UKD2 239 aaKnown RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 ZNF490Q9ULM2 529 aaPredicted RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 AURKCQ9UQB9 309 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 PRG3Q9Y2Y8 225 aaPredicted RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 MRPS18BQ9Y676 258 aaKnown RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 V9GYQ6 96 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 TNRC6CQ9HCJ0 1690 aaKnown RBP2.34□□□□□ -2.04
LINC01040-201ENST00000425048 NRXN2Q9P2S2 1712 aa2.34□□□□□ -2.04
LINC01040-201ENST00000425048 GLI3P10071 1580 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 hCG_1818297A0A087WSY0 165 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 FAM240BA0A1B0GVZ2 78 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 TMEM72A0PK05 275 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 LRIT2A6NDA9 550 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 TRDCB7Z8K6 153 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 GPR89AB7ZAQ6 455 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 C11orf98E9PRG8 122 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 H7C417 338 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 CXCL11O14625 94 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 BCKDKO14874 412 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 MSH4O15457 936 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 OR10H3O60404 316 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 EIF4E2O60573 245 aaKnown RBP2.33□□□□□ -2.04
LINC01040-201ENST00000425048 FMO6PO60774 539 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 AKAP3O75969 853 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 SNAPC5O75971 98 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 PROSCO94903 275 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 SIX3O95343 332 aaPredicted RBP2.33□□□□□ -2.04
LINC01040-201ENST00000425048 SLC25A27O95847 323 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 NDUFB10O96000 172 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 SERPINA3P01011 423 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 PMP2P02689 132 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 ADRA2AP08913 450 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 GPR89BP0CG08 455 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 STAG3L3P0CL85 134 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 GIMD1P0DJR0 217 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 CT45A8P0DMV1 189 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 CT45A9P0DMV2 189 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 PGAM1P18669 254 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 NFYBP25208 207 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 TEAD1P28347 426 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 HSD11B1P28845 292 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 SLC6A1P30531 599 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 MAS1LP35410 378 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 MAGEA2P43356 314 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 MAGEA3P43357 314 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 MAGEA6P43360 314 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 CDC34P49427 236 aaPredicted RBP2.33□□□□□ -2.04
LINC01040-201ENST00000425048 SRP9P49458 86 aaKnown RBP2.33□□□□□ -2.04
LINC01040-201ENST00000425048 RPL14P50914 215 aaKnown RBP2.33□□□□□ -2.04
LINC01040-201ENST00000425048 RAB5CP51148 216 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 PRKXP51817 358 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 CRYBB1P53674 252 aaPredicted RBP2.33□□□□□ -2.04
LINC01040-201ENST00000425048 CRISP3P54108 245 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 TMEM33P57088 247 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 GMFBP60983 142 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 SELENOTP62341 195 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 EGFEM1PQ0D2K5 195 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 NPRL3Q12980 569 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 CHIT1Q13231 466 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 GPR176Q14439 515 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 CLINT1Q14677 625 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 LASP1Q14847 261 aaKnown RBP2.33□□□□□ -2.04
LINC01040-201ENST00000425048 RSU1Q15404 277 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 SSX1Q16384 188 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 CYP51A1Q16850 503 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 SPIN4Q56A73 249 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 CT45A2Q5DJT8 189 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 ARMC12Q5T9G4 340 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 STEAP4Q687X5 459 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 KCTD11Q693B1 232 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF660Q6AZW8 331 aaPredicted RBP2.33□□□□□ -2.04
LINC01040-201ENST00000425048 OR8G2PQ6IF36 304 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 OR52W1Q6IF63 320 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 ADNP2Q6IQ32 1131 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 SLC30A6Q6NXT4 461 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 DNAJC24Q6P3W2 148 aa2.33□□□□□ -2.04
LINC01040-201ENST00000425048 METAP1DQ6UB28 335 aaPredicted RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms