RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 PRAMEF6Q5VXH4 476 aa13.44□□□□□ -0.26
DDR1-234ENST00000424544 BTNL3Q6UXE8 466 aa13.44□□□□□ -0.26
DDR1-234ENST00000424544 PRSS45Q7RTY3 260 aa13.44□□□□□ -0.26
DDR1-234ENST00000424544 ZNF485Q8NCK3 441 aa13.44□□□□□ -0.26
DDR1-234ENST00000424544 OR8B3Q8NGG8 313 aa13.44□□□□□ -0.26
DDR1-234ENST00000424544 HAVCR2Q8TDQ0 301 aa13.44□□□□□ -0.26
DDR1-234ENST00000424544 OR8B2Q96RD0 313 aa13.44□□□□□ -0.26
DDR1-234ENST00000424544 TMEM269A0A1B0GVZ9 245 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 TRIM64CA6NLI5 447 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 C22orf46C9J442 243 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 BAMBIQ13145 260 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 MED22Q15528 200 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 TBCEQ15813 527 aaPredicted RBP13.43□□□□□ -0.26
DDR1-234ENST00000424544 KCTD8Q6ZWB6 473 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 NLRC3Q7RTR2 1065 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 MRPL21Q7Z2W9 205 aaKnown RBP13.43□□□□□ -0.26
DDR1-234ENST00000424544 C11orf53Q8IXP5 236 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 SPERTQ8NA61 448 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 OR11L1Q8NGX0 322 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 OR2AE1Q8NHA4 323 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 PELI1Q96FA3 418 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 OR5M11Q96RB7 305 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 NUDT16L1Q9BRJ7 211 aaKnown RBP13.43□□□□□ -0.26
DDR1-234ENST00000424544 MS4A7Q9GZW8 240 aaPredicted RBP13.43□□□□□ -0.26
DDR1-234ENST00000424544 SP140LQ9H930 580 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 UFSP2Q9NUQ7 469 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 ACOXLQ9NUZ1 547 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 RNF7Q9UBF6 113 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 CTSZQ9UBR2 303 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 CLN8Q9UBY8 286 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 LSM2Q9Y333 95 aaKnown RBP13.43□□□□□ -0.26
DDR1-234ENST00000424544 R4GMQ9 66 aa13.43□□□□□ -0.26
DDR1-234ENST00000424544 ACOD1A6NK06 481 aa13.42□□□□□ -0.26
DDR1-234ENST00000424544 SPRY1O43609 319 aaPredicted RBP13.42□□□□□ -0.26
DDR1-234ENST00000424544 SRSF10O75494 262 aaKnown RBP13.42□□□□□ -0.26
DDR1-234ENST00000424544 FCN3O75636 299 aa13.42□□□□□ -0.26
DDR1-234ENST00000424544 IRF2P14316 349 aa13.42□□□□□ -0.26
DDR1-234ENST00000424544 ATP6V1B1P15313 513 aa13.42□□□□□ -0.26
DDR1-234ENST00000424544 CX3CR1P49238 355 aa13.42□□□□□ -0.26
DDR1-234ENST00000424544 NPY4RP50391 375 aa13.42□□□□□ -0.26
DDR1-234ENST00000424544 BPIFB3P59826 476 aa13.42□□□□□ -0.26
DDR1-234ENST00000424544 ACSM1Q08AH1 577 aa13.42□□□□□ -0.26
DDR1-234ENST00000424544 ZNF829Q3KNS6 432 aaPredicted RBP13.42□□□□□ -0.26
DDR1-234ENST00000424544 FDX2Q6P4F2 183 aa13.42□□□□□ -0.26
DDR1-234ENST00000424544 C19orf18Q8NEA5 215 aa13.42□□□□□ -0.26
DDR1-234ENST00000424544 FCGR1BQ92637 280 aa13.42□□□□□ -0.26
DDR1-234ENST00000424544 RORBQ92753 470 aa13.42□□□□□ -0.26
DDR1-234ENST00000424544 SGK3Q96BR1 496 aa13.42□□□□□ -0.26
DDR1-234ENST00000424544 DUX5Q96PT3 197 aa13.42□□□□□ -0.26
DDR1-234ENST00000424544 ISYNA1Q9NPH2 558 aa13.42□□□□□ -0.26
DDR1-234ENST00000424544 NOP16Q9Y3C1 178 aaKnown RBP13.42□□□□□ -0.26
DDR1-234ENST00000424544 E9PI62 339 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 LGALS8O00214 317 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 OGG1O15527 345 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 NDUFA2O43678 99 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 MMP9P14780 707 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 DDOSTP39656 456 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 TGM4P49221 684 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 ZNF121P58317 390 aaPredicted RBP13.41□□□□□ -0.26
DDR1-234ENST00000424544 PSMA6P60900 246 aaKnown RBP13.41□□□□□ -0.26
DDR1-234ENST00000424544 FAM3AP98173 230 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 OR8G1Q15617 311 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 CCDC58Q4VC31 144 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 UBE2UQ5VVX9 321 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 RPL22L1Q6P5R6 122 aaKnown RBP13.41□□□□□ -0.26
DDR1-234ENST00000424544 ZNF367Q7RTV3 350 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 GCSAMQ8N6F7 178 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 RNF166Q96A37 237 aaPredicted RBP13.41□□□□□ -0.26
DDR1-234ENST00000424544 MRPS26Q9BYN8 205 aaKnown RBP13.41□□□□□ -0.26
DDR1-234ENST00000424544 FN3KRPQ9HA64 309 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 VCX3AQ9NNX9 186 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 BRD7Q9NPI1 651 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 TRIM36Q9NQ86 728 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 OR52A1Q9UKL2 312 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 N6AMT1Q9Y5N5 214 aa13.41□□□□□ -0.26
DDR1-234ENST00000424544 IGHV3OR16-10A0A075B7F0 116 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 GGT3PA6NGU5 568 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 LOC110117498-PIK3R3F6TDL0 507 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 TMPRSS2O15393 492 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 LALBAP00709 142 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 LIPFP07098 398 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 ANXA2P07355 339 aaKnown RBP13.4□□□□□ -0.26
DDR1-234ENST00000424544 SMIM18P0DKX4 95 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 SLC2A1P11166 492 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 JUNBP17275 347 aaPredicted RBP13.4□□□□□ -0.26
DDR1-234ENST00000424544 CCR9P51686 369 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 GTF2A1P52655 376 aaPredicted RBP13.4□□□□□ -0.26
DDR1-234ENST00000424544 TAS2R43P59537 309 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 BDH1Q02338 343 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 ALKBH1Q13686 389 aaKnown RBP13.4□□□□□ -0.26
DDR1-234ENST00000424544 KCNJ8Q15842 424 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 C11orf91Q3C1V1 193 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 PRR31Q5SQ13 230 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 TEX36Q5VZQ5 186 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 SFRP4Q6FHJ7 346 aaPredicted RBP13.4□□□□□ -0.26
DDR1-234ENST00000424544 XAF1Q6GPH4 301 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 SHISA2Q6UWI4 295 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 ZNF826PQ6ZT77 177 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 FAM57BQ71RH2 274 aa13.4□□□□□ -0.26
DDR1-234ENST00000424544 OR56B2PQ8NGI1 322 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms