RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 A6NLC8 198 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 IFNL4K9M1U5 179 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 GABRPO00591 440 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 UCHL1P09936 223 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 RAB3AP20336 220 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 DSCR9P59020 149 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 PPP3R1P63098 170 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 CARTPTQ16568 116 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 ZNF181Q2M3W8 571 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 CLEC2AQ6UVW9 174 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 CEACAM19Q7Z692 300 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 C11orf53Q8IXP5 236 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 SCCPDHQ8NBX0 429 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 ZNF420Q8TAQ5 688 aaPredicted RBP14.33□□□□□ -0.12
COL7A1-202ENST00000422991 CCL17Q92583 94 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 RPL3LQ92901 407 aaKnown RBP14.33□□□□□ -0.12
COL7A1-202ENST00000422991 BORCS8Q96FH0 119 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 TMEM106BQ9NUM4 274 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 C1orf123Q9NWV4 160 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 DCAF16Q9NXF7 216 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 CKLFQ9UBR5 152 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 FLNAP21333 2647 aaKnown RBP14.32□□□□□ -0.12
COL7A1-202ENST00000422991 GIFP27352 417 aa14.32□□□□□ -0.12
COL7A1-202ENST00000422991 RBMXP38159 391 aaKnown RBP14.32□□□□□ -0.12
COL7A1-202ENST00000422991 RBP2P50120 134 aa14.32□□□□□ -0.12
COL7A1-202ENST00000422991 RIN1Q13671 783 aa14.32□□□□□ -0.12
COL7A1-202ENST00000422991 CLEC12BQ2HXU8 276 aa14.32□□□□□ -0.12
COL7A1-202ENST00000422991 SHEQ5VZ18 495 aa14.32□□□□□ -0.12
COL7A1-202ENST00000422991 WDR82Q6UXN9 313 aa14.32□□□□□ -0.12
COL7A1-202ENST00000422991 ZNF826PQ6ZT77 177 aa14.32□□□□□ -0.12
COL7A1-202ENST00000422991 LHFPL2Q6ZUX7 228 aa14.32□□□□□ -0.12
COL7A1-202ENST00000422991 ZNF573Q86YE8 665 aa14.32□□□□□ -0.12
COL7A1-202ENST00000422991 OR11L1Q8NGX0 322 aa14.32□□□□□ -0.12
COL7A1-202ENST00000422991 C10orf105Q8TEF2 133 aa14.32□□□□□ -0.12
COL7A1-202ENST00000422991 PHYHIPQ92561 330 aa14.32□□□□□ -0.12
COL7A1-202ENST00000422991 FAM168AQ92567 244 aa14.32□□□□□ -0.12
COL7A1-202ENST00000422991 HPS1Q92902 700 aa14.32□□□□□ -0.12
COL7A1-202ENST00000422991 PPIL3Q9H2H8 161 aaKnown RBP14.32□□□□□ -0.12
COL7A1-202ENST00000422991 NEK6Q9HC98 313 aa14.32□□□□□ -0.12
COL7A1-202ENST00000422991 STUB1Q9UNE7 303 aa14.32□□□□□ -0.12
COL7A1-202ENST00000422991 FOXJ3Q9UPW0 622 aa14.32□□□□□ -0.12
COL7A1-202ENST00000422991 TRDV1A0A1B0GX56 115 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 LRRC30A6NM36 301 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 CLDN25C9JDP6 229 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 TMEM178BH3BS89 294 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 J3QT63 122 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 NDUFS8O00217 210 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 CDIPTO14735 213 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 HCKP08631 526 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 OCMP0CE72 109 aaPredicted RBP14.31□□□□□ -0.12
COL7A1-202ENST00000422991 CD36P16671 472 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 GALP22466 123 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 MPZP25189 248 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 HAAOP46952 286 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 ATP1B3P54709 279 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 HSD17B12Q53GQ0 312 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 HAGHLQ6PII5 290 aaPredicted RBP14.31□□□□□ -0.12
COL7A1-202ENST00000422991 CRIP3Q6Q6R5 217 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 CALHM1Q8IU99 346 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 AQP3Q92482 292 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 YIPF6Q96EC8 236 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 SPACA5Q96QH8 159 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 TMEM138Q9NPI0 162 aa14.31□□□□□ -0.12
COL7A1-202ENST00000422991 hCG_1807616A0A1W2PRN6 198 aa14.3□□□□□ -0.12
COL7A1-202ENST00000422991 TRIM64BA6NI03 449 aa14.3□□□□□ -0.12
COL7A1-202ENST00000422991 ARL6IP5O75915 188 aa14.3□□□□□ -0.12
COL7A1-202ENST00000422991 CYB5R3P00387 301 aaPredicted RBP14.3□□□□□ -0.12
COL7A1-202ENST00000422991 ALDOBP05062 364 aa14.3□□□□□ -0.12
COL7A1-202ENST00000422991 TFAP2AP05549 437 aa14.3□□□□□ -0.12
COL7A1-202ENST00000422991 BDKRB2P30411 391 aa14.3□□□□□ -0.12
COL7A1-202ENST00000422991 CFHR2P36980 270 aa14.3□□□□□ -0.12
COL7A1-202ENST00000422991 MTCP1P56278 107 aa14.3□□□□□ -0.12
COL7A1-202ENST00000422991 TMEM33P57088 247 aa14.3□□□□□ -0.12
COL7A1-202ENST00000422991 RNF144BQ7Z419 303 aa14.3□□□□□ -0.12
COL7A1-202ENST00000422991 ANGPTL5Q86XS5 388 aa14.3□□□□□ -0.12
COL7A1-202ENST00000422991 OR52N4Q8NGI2 321 aa14.3□□□□□ -0.12
COL7A1-202ENST00000422991 OR13F1Q8NGS4 319 aa14.3□□□□□ -0.12
COL7A1-202ENST00000422991 OR10Z1Q8NGY1 313 aa14.3□□□□□ -0.12
COL7A1-202ENST00000422991 PIMREGQ9BSJ6 248 aa14.3□□□□□ -0.12
COL7A1-202ENST00000422991 PKIBQ9C010 78 aa14.3□□□□□ -0.12
COL7A1-202ENST00000422991 RNF7Q9UBF6 113 aa14.3□□□□□ -0.12
COL7A1-202ENST00000422991 IGHV4-30-2A0A087WSY4 118 aa14.29□□□□□ -0.12
COL7A1-202ENST00000422991 VWC2LB2RUY7 222 aa14.29□□□□□ -0.12
COL7A1-202ENST00000422991 PPIHO43447 177 aaKnown RBP14.29□□□□□ -0.12
COL7A1-202ENST00000422991 SYNGR1O43759 233 aa14.29□□□□□ -0.12
COL7A1-202ENST00000422991 RHBDL1O75783 438 aa14.29□□□□□ -0.12
COL7A1-202ENST00000422991 IRF2P14316 349 aa14.29□□□□□ -0.12
COL7A1-202ENST00000422991 GADD45AP24522 165 aa14.29□□□□□ -0.12
COL7A1-202ENST00000422991 ALDH3B2P48448 385 aa14.29□□□□□ -0.12
COL7A1-202ENST00000422991 KISS1Q15726 138 aa14.29□□□□□ -0.12
COL7A1-202ENST00000422991 DDI2Q5TDH0 399 aa14.29□□□□□ -0.12
COL7A1-202ENST00000422991 C1orf87Q8N0U7 546 aa14.29□□□□□ -0.12
COL7A1-202ENST00000422991 GCSAMQ8N6F7 178 aa14.29□□□□□ -0.12
COL7A1-202ENST00000422991 WFDC11Q8NEX6 87 aa14.29□□□□□ -0.12
COL7A1-202ENST00000422991 LRRC29Q8WV35 223 aa14.29□□□□□ -0.12
COL7A1-202ENST00000422991 RFT1Q96AA3 541 aa14.29□□□□□ -0.12
COL7A1-202ENST00000422991 CPNE2Q96FN4 548 aaPredicted RBP14.29□□□□□ -0.12
COL7A1-202ENST00000422991 OR51E2Q9H255 320 aa14.29□□□□□ -0.12
COL7A1-202ENST00000422991 METTL17Q9H7H0 456 aaPredicted RBP14.29□□□□□ -0.12
COL7A1-202ENST00000422991 SRRM5B3KS81 715 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms