RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 U3KQA8 63 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 NCKAP5O14513 1909 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 CD63P08962 238 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 LPAR6P43657 344 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 H3F3AP84243 136 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 IL15RAQ13261 267 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 RBM39Q14498 530 aaKnown RBP13.81□□□□□ -0.2
CDH1-202ENST00000422392 IAH1Q2TAA2 248 aaPredicted RBP13.81□□□□□ -0.2
CDH1-202ENST00000422392 BRICD5Q6PL45 260 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 C20orf196Q8IYI0 205 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 ADAMTS17Q8TE56 1095 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 SLC25A43Q8WUT9 341 aaPredicted RBP13.81□□□□□ -0.2
CDH1-202ENST00000422392 DYRK2Q92630 601 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 PIGQQ9BRB3 760 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 CHST5Q9GZS9 411 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 PARP12Q9H0J9 701 aaKnown RBP13.81□□□□□ -0.2
CDH1-202ENST00000422392 LIME1Q9H400 295 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 H7C2Y5 167 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 M0R135 149 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 TOX3O15405 576 aaPredicted RBP13.81□□□□□ -0.2
CDH1-202ENST00000422392 NDUFA2O43678 99 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 GLI4P10075 376 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 MUC1P15941 1255 aaPredicted RBP13.81□□□□□ -0.2
CDH1-202ENST00000422392 ACKR3P25106 362 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 LSM6P62312 80 aaKnown RBP13.81□□□□□ -0.2
CDH1-202ENST00000422392 HAS2Q92819 552 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 EMG1Q92979 244 aaKnown RBP13.81□□□□□ -0.2
CDH1-202ENST00000422392 FBXO17Q96EF6 278 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 ZNF799Q96GE5 643 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 TAF9BQ9HBM6 251 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 C14orf166Q9Y224 244 aaKnown RBP13.81□□□□□ -0.2
CDH1-202ENST00000422392 PRELID3BQ9Y3B1 194 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 V9GYS6 101 aa13.81□□□□□ -0.2
CDH1-202ENST00000422392 NPIPA2E9PIF3 369 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 NPIPA3F8WFD2 350 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 MED6O75586 246 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 TMEM225BP0DP42 221 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 HKR1P10072 659 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 ZNF708P17019 499 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 PVALBP20472 110 aaPredicted RBP13.8□□□□□ -0.2
CDH1-202ENST00000422392 OPRM1P35372 400 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 THBS4P35443 961 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 EIF1P41567 113 aaKnown RBP13.8□□□□□ -0.2
CDH1-202ENST00000422392 PJVKQ0ZLH3 352 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 STK11Q15831 433 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 TAF9Q16594 264 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 CDCP2Q5VXM1 449 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 OR5T2Q8NGG2 359 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 SLC39A7Q92504 469 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 FAAP24Q9BTP7 215 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 RHOFQ9HBH0 211 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 PLA2G2EQ9NZK7 142 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 SCGB1D2O95969 90 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 IFNA2P01563 188 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 CPT2P23786 658 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 CTSSP25774 331 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 RBMXP38159 391 aaKnown RBP13.8□□□□□ -0.2
CDH1-202ENST00000422392 FLI1Q01543 452 aaPredicted RBP13.8□□□□□ -0.2
CDH1-202ENST00000422392 SP6Q3SY56 376 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 RHBDD1Q8TEB9 315 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 MLXQ9UH92 298 aa13.8□□□□□ -0.2
CDH1-202ENST00000422392 MRPS17Q9Y2R5 130 aaKnown RBP13.8□□□□□ -0.2
CDH1-202ENST00000422392 LSM5Q9Y4Y9 91 aaKnown RBP13.8□□□□□ -0.2
CDH1-202ENST00000422392 FAM230AA0A1W2PPH8 454 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 FIGNL2A6NMB9 653 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 SERPINE3A8MV23 424 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 TNFSF11O14788 317 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 PATE4P0C8F1 98 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 ADH6P28332 368 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 ALDH3B1P43353 468 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 PCOLCEQ15113 449 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 C10orf91Q5T1B1 145 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 OR10Z1Q8NGY1 313 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 TOMM40LQ969M1 308 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 MRPL24Q96A35 216 aaKnown RBP13.79□□□□□ -0.2
CDH1-202ENST00000422392 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.79□□□□□ -0.2
CDH1-202ENST00000422392 C19orf25Q9UFG5 118 aaPredicted RBP13.79□□□□□ -0.2
CDH1-202ENST00000422392 CARHSP1Q9Y2V2 147 aaKnown RBP13.79□□□□□ -0.2
CDH1-202ENST00000422392 A0A0U1RQV5 110 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 FAM221AA4D161 298 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 TP53I11O14683 189 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 DHHO43323 396 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 MTCP1P56278 107 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 HGFACQ04756 655 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 FAM189A2Q15884 450 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 ZNF239Q16600 458 aaKnown RBP13.79□□□□□ -0.2
CDH1-202ENST00000422392 RPUSD3Q6P087 351 aaKnown RBP13.79□□□□□ -0.2
CDH1-202ENST00000422392 MRPL14Q6P1L8 145 aaKnown RBP13.79□□□□□ -0.2
CDH1-202ENST00000422392 SLC16A14Q7RTX9 510 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 SULF2Q8IWU5 870 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 LINC00518Q8N0U6 118 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 SGK3Q96BR1 496 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 NRIP2Q9BQI9 281 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 TM2D1Q9BX74 207 aa13.79□□□□□ -0.2
CDH1-202ENST00000422392 C10orf128Q5T292 105 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 TSPO2Q5TGU0 170 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 OR9K2Q8NGE7 335 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 PROK2Q9HC23 129 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 C1orf123Q9NWV4 160 aa13.78□□□□□ -0.2
CDH1-202ENST00000422392 GHRLQ9UBU3 117 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms