RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 FARS2O95363 451 aaKnown RBP9.55□□□□□ -0.88
DDX56-203ENST00000421223 GLI4P10075 376 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 ARF1P84077 181 aaKnown RBP9.55□□□□□ -0.88
DDX56-203ENST00000421223 CHRFAM7AQ494W8 412 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 PABPC1L2AQ5JQF8 200 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 MRGPRFQ96AM1 343 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 DHRS9Q9BPW9 319 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 ZPBPQ9BS86 351 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 FAAP24Q9BTP7 215 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 SF3B5Q9BWJ5 86 aaKnown RBP9.55□□□□□ -0.88
DDX56-203ENST00000421223 TMPRSS13Q9BYE2 586 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 GPR35Q9HC97 309 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 SLC7A10Q9NS82 523 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 B4GALT7Q9UBV7 327 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 C9orf170A2RU37 121 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 APOC1P02654 83 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 CD37P11049 281 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 IL32P24001 234 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 THBS4P35443 961 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 RIPPLY1Q0D2K3 151 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 RAB35Q15286 201 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 LY6G6FQ5SQ64 297 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 OR52H1Q8NGJ2 320 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 PPP1R1CQ8WVI7 109 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 INTS12Q96CB8 462 aaKnown RBP9.55□□□□□ -0.88
DDX56-203ENST00000421223 FAM173AQ9BQD7 235 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 CHST5Q9GZS9 411 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 NARFLQ9H6Q4 476 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 ACKR4Q9NPB9 350 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 TIMM10BQ9Y5J6 103 aa9.55□□□□□ -0.88
DDX56-203ENST00000421223 A0A0U1RQV5 110 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 SYNGR4O95473 234 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 ZNF250P15622 560 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 M6PRP20645 277 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 GLRA1P23415 457 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 ATP1B3P54709 279 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 RPS27AP62979 156 aaKnown RBP9.54□□□□□ -0.88
DDX56-203ENST00000421223 ZNF92Q03936 586 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 PDSS1Q5T2R2 415 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 PLCXD3Q63HM9 321 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 LYG2Q86SG7 212 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 MCEMP1Q8IX19 187 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 RELL2Q8NC24 303 aaPredicted RBP9.54□□□□□ -0.88
DDX56-203ENST00000421223 PP6455Q8WZ26 134 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 CPNE4Q96A23 557 aaPredicted RBP9.54□□□□□ -0.88
DDX56-203ENST00000421223 PHB2Q99623 299 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 GSX2Q9BZM3 304 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 GSKIPQ9P0R6 139 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 SPEF1Q9Y4P9 236 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 PCDHGA1Q9Y5H4 931 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 CFAP47Q6ZTR5 3102 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 BOD1L1Q8NFC6 3051 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 SYNGR3O43761 229 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 SCGNO76038 276 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 NRASP01111 189 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 HPNP05981 417 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 RRASP10301 218 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 CCL1P22362 96 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 AANATQ16613 207 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 PXDC1Q5TGL8 231 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 DRAM2Q6UX65 266 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 OR2W3Q7Z3T1 314 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 BOLLQ8N9W6 283 aaKnown RBP9.54□□□□□ -0.88
DDX56-203ENST00000421223 TERB2Q8NHR7 220 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 CPT1CQ8TCG5 803 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 HAS2Q92819 552 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 WBP1Q96G27 269 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 TTTY12Q9BZ98 90 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 OR2H1Q9GZK4 316 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 FN3KRPQ9HA64 309 aa9.54□□□□□ -0.88
DDX56-203ENST00000421223 C5orf49A4QMS7 147 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 OR6C65A6NJZ3 312 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 ADAP1O75689 374 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 MELTFP08582 738 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 GSTP1P09211 210 aaKnown RBP9.53□□□□□ -0.88
DDX56-203ENST00000421223 CBX5P45973 191 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 MAJINQ3KP22 176 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 NHLRC3Q5JS37 347 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 FAM74A1Q5RGS3 127 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 CLVS2Q5SYC1 327 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 C16orf54Q6UWD8 224 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 GSG1LQ6UXU4 331 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 DBX2Q6ZNG2 339 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.53□□□□□ -0.88
DDX56-203ENST00000421223 SLC25A42Q86VD7 318 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 TMEM251Q8N6I4 163 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 TOMM40LQ969M1 308 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 DDA1Q9BW61 102 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 PECRQ9BY49 303 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 WNT5BQ9H1J7 359 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 METTL8Q9H825 291 aaKnown RBP9.53□□□□□ -0.88
DDX56-203ENST00000421223 TMEM9BQ9NQ34 198 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 EFSO43281 561 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 CTSSP25774 331 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 ARHGDIBP52566 201 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 GFRA1P56159 465 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 PPIAP62937 165 aaKnown RBP9.53□□□□□ -0.88
DDX56-203ENST00000421223 GK2Q14410 553 aaPredicted RBP9.53□□□□□ -0.88
DDX56-203ENST00000421223 PIGYQ3MUY2 71 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 ZNF100Q8IYN0 542 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms