RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 CDCA4Q9BXL8 241 aa10.4□□□□□ -0.74
LINC00339-203ENST00000420503 NPFFR1Q9GZQ6 430 aa10.4□□□□□ -0.74
LINC00339-203ENST00000420503 RANBP3Q9H6Z4 567 aaPredicted RBP10.4□□□□□ -0.74
LINC00339-203ENST00000420503 IL1RAPQ9NPH3 570 aa10.4□□□□□ -0.74
LINC00339-203ENST00000420503 DSCAML1Q8TD84 2053 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 PRR32B1ATL7 298 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 ZNF732B4DXR9 585 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 TNFRSF11BO00300 401 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 CST4P01036 141 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 PIPP12273 146 aaPredicted RBP10.39□□□□□ -0.75
LINC00339-203ENST00000420503 ATP6V1B2P21281 511 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 IFNGR2P38484 337 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 SLC15A1P46059 708 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 CAPZA1P52907 286 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 HCCSP53701 268 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 IL5RAQ01344 420 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 FAM76BQ5HYJ3 339 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 SAMD4BQ5PRF9 694 aaKnown RBP10.39□□□□□ -0.75
LINC00339-203ENST00000420503 TMEM200BQ69YZ2 307 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 CYP2R1Q6VVX0 501 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 TIGD4Q8IY51 512 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 CSNK2A3Q8NEV1 391 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 PPP1R14AQ96A00 147 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 MCUR1Q96AQ8 359 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 OTULINQ96BN8 352 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 SLC7A6OSQ96CW6 309 aaPredicted RBP10.39□□□□□ -0.75
LINC00339-203ENST00000420503 MED30Q96HR3 178 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 DMRTB1Q96MA1 342 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 NSMCE2Q96MF7 247 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 DNTTIP1Q9H147 329 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 OR51I2Q9H344 312 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 U3KQV3 271 aa10.39□□□□□ -0.75
LINC00339-203ENST00000420503 RFPL4AA6NLU0 287 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 TMEM210A6NLX4 147 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 RFPL4AL1F8VTS6 287 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 PSMD9O00233 223 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 SYNGR1O43759 233 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 H2BFMP0C1H6 154 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 GSTT1P30711 240 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 KRTAP10-11P60412 298 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 BLCAPP62952 87 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 BNIP1Q12981 228 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 BLMHQ13867 455 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 HAGHLQ6PII5 290 aaPredicted RBP10.38□□□□□ -0.75
LINC00339-203ENST00000420503 THAP5Q7Z6K1 395 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 ZDHHC23Q8IYP9 409 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 ARHGAP24Q8N264 748 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 Q8N2B8 174 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 OR52H1Q8NGJ2 320 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 OR5D13Q8NGL4 314 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 NIPSNAP1Q9BPW8 284 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 TTTY10Q9BZA0 68 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 OR51V1Q9H2C8 321 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 MAGEL2Q9UJ55 1249 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 TCF19Q9Y242 345 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 MPC1Q9Y5U8 109 aa10.38□□□□□ -0.75
LINC00339-203ENST00000420503 WI2-2373I1.2A0A1W2PRP0 233 aa10.37□□□□□ -0.75
LINC00339-203ENST00000420503 A6NDX4 124 aa10.37□□□□□ -0.75
LINC00339-203ENST00000420503 MTRF1O75570 445 aaKnown RBP10.37□□□□□ -0.75
LINC00339-203ENST00000420503 CCNB2O95067 398 aa10.37□□□□□ -0.75
LINC00339-203ENST00000420503 HMGA2P52926 109 aa10.37□□□□□ -0.75
LINC00339-203ENST00000420503 DLX6P56179 175 aa10.37□□□□□ -0.75
LINC00339-203ENST00000420503 RPL31P62899 125 aaKnown RBP10.37□□□□□ -0.75
LINC00339-203ENST00000420503 TCTEX1D4Q5JR98 221 aa10.37□□□□□ -0.75
LINC00339-203ENST00000420503 VAX1Q5SQQ9 334 aa10.37□□□□□ -0.75
LINC00339-203ENST00000420503 RPL13AP3Q6NVV1 102 aa10.37□□□□□ -0.75
LINC00339-203ENST00000420503 C10orf99Q6UWK7 81 aa10.37□□□□□ -0.75
LINC00339-203ENST00000420503 NDUFA11Q86Y39 141 aa10.37□□□□□ -0.75
LINC00339-203ENST00000420503 BBS1Q8NFJ9 593 aa10.37□□□□□ -0.75
LINC00339-203ENST00000420503 OR2T33Q8NG76 320 aa10.37□□□□□ -0.75
LINC00339-203ENST00000420503 AQP3Q92482 292 aa10.37□□□□□ -0.75
LINC00339-203ENST00000420503 SDSLQ96GA7 329 aa10.37□□□□□ -0.75
LINC00339-203ENST00000420503 WNT10AQ9GZT5 417 aa10.37□□□□□ -0.75
LINC00339-203ENST00000420503 FAM234AQ9H0X4 552 aa10.37□□□□□ -0.75
LINC00339-203ENST00000420503 TENM3Q9P273 2699 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 TRBV23-1A0A0A0MS06 115 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 FAM90A8PA6NJQ4 464 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 RIIAD1A6NNX1 92 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 XPNPEP2O43895 674 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 GMNNO75496 209 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 FAHP16930 419 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 CFL1P23528 166 aaKnown RBP10.36□□□□□ -0.75
LINC00339-203ENST00000420503 PSMA6P60900 246 aaKnown RBP10.36□□□□□ -0.75
LINC00339-203ENST00000420503 SSX2Q16385 188 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 AANATQ16613 207 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 PLBD1Q6P4A8 553 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 C11orf88Q6PI97 169 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 ACP7Q6ZNF0 438 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 MOB3CQ70IA8 216 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 TCF23Q7RTU1 214 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 OR4S1Q8NGB4 309 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 OR5K1Q8NHB7 308 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 THEM6Q8WUY1 208 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 CMC2Q9NRP2 79 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 LRP12Q9Y561 859 aa10.36□□□□□ -0.75
LINC00339-203ENST00000420503 TCRBV5S2A0A599 114 aa10.35□□□□□ -0.75
LINC00339-203ENST00000420503 SH2D7A6NKC9 451 aaPredicted RBP10.35□□□□□ -0.75
LINC00339-203ENST00000420503 GLCEO94923 617 aa10.35□□□□□ -0.75
LINC00339-203ENST00000420503 LYNP07948 512 aa10.35□□□□□ -0.75
LINC00339-203ENST00000420503 MS4A2Q01362 244 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms