RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 TINAGQ9UJW2 476 aa18.04■□□□□ 0.48
GPC1-202ENST00000420138 MAP1BP46821 2468 aaKnown RBP18.04■□□□□ 0.48
GPC1-202ENST00000420138 INTS1Q8N201 2190 aaKnown RBP18.03■□□□□ 0.48
GPC1-202ENST00000420138 OR5H1A6NKK0 313 aa18.03■□□□□ 0.48
GPC1-202ENST00000420138 ZNF850A8MQ14 1090 aa18.03■□□□□ 0.48
GPC1-202ENST00000420138 J3QW42 95 aa18.03■□□□□ 0.48
GPC1-202ENST00000420138 ERVH48-1M5A8F1 160 aa18.03■□□□□ 0.48
GPC1-202ENST00000420138 SMPD2O60906 423 aa18.03■□□□□ 0.48
GPC1-202ENST00000420138 CST4P01036 141 aa18.03■□□□□ 0.48
GPC1-202ENST00000420138 PSMB1P20618 241 aaKnown RBP18.03■□□□□ 0.48
GPC1-202ENST00000420138 RBP2P50120 134 aa18.03■□□□□ 0.48
GPC1-202ENST00000420138 SLC22A6Q4U2R8 563 aa18.03■□□□□ 0.48
GPC1-202ENST00000420138 TMEM255AQ5JRV8 349 aa18.03■□□□□ 0.48
GPC1-202ENST00000420138 LHFPL2Q6ZUX7 228 aa18.03■□□□□ 0.48
GPC1-202ENST00000420138 TECTBQ96PL2 329 aa18.03■□□□□ 0.48
GPC1-202ENST00000420138 NUDT16L1Q9BRJ7 211 aaKnown RBP18.03■□□□□ 0.48
GPC1-202ENST00000420138 C20orf85Q9H1P6 137 aa18.03■□□□□ 0.48
GPC1-202ENST00000420138 ING4Q9UNL4 249 aa18.03■□□□□ 0.48
GPC1-202ENST00000420138 CD300LBA8K4G0 201 aa18.02■□□□□ 0.48
GPC1-202ENST00000420138 IGLV1-44P01699 117 aa18.02■□□□□ 0.48
GPC1-202ENST00000420138 VEGFCP49767 419 aa18.02■□□□□ 0.48
GPC1-202ENST00000420138 FUT6P51993 359 aa18.02■□□□□ 0.48
GPC1-202ENST00000420138 PLCXD3Q63HM9 321 aa18.02■□□□□ 0.48
GPC1-202ENST00000420138 ASCL4Q6XD76 172 aa18.02■□□□□ 0.48
GPC1-202ENST00000420138 OR10K1Q8NGX5 313 aa18.02■□□□□ 0.48
GPC1-202ENST00000420138 BORCS8Q96FH0 119 aa18.02■□□□□ 0.48
GPC1-202ENST00000420138 TMEM59Q9BXS4 323 aa18.02■□□□□ 0.48
GPC1-202ENST00000420138 OBP2BQ9NPH6 170 aa18.02■□□□□ 0.48
GPC1-202ENST00000420138 TAS2R8Q9NYW2 309 aa18.02■□□□□ 0.48
GPC1-202ENST00000420138 ZNF629Q9UEG4 869 aaPredicted RBP18.02■□□□□ 0.48
GPC1-202ENST00000420138 LILRA1O75019 489 aa18.02■□□□□ 0.47
GPC1-202ENST00000420138 CRTAPO75718 401 aaPredicted RBP18.02■□□□□ 0.47
GPC1-202ENST00000420138 C1QBP02746 253 aa18.02■□□□□ 0.47
GPC1-202ENST00000420138 HOXC12P31275 282 aa18.02■□□□□ 0.47
GPC1-202ENST00000420138 RPS27AP62979 156 aaKnown RBP18.02■□□□□ 0.47
GPC1-202ENST00000420138 RBPJQ06330 500 aa18.02■□□□□ 0.47
GPC1-202ENST00000420138 FCN2Q15485 313 aa18.02■□□□□ 0.47
GPC1-202ENST00000420138 CD276Q5ZPR3 534 aa18.02■□□□□ 0.47
GPC1-202ENST00000420138 FAM89BQ8N5H3 189 aa18.02■□□□□ 0.47
GPC1-202ENST00000420138 OR10R2Q8NGX6 335 aa18.02■□□□□ 0.47
GPC1-202ENST00000420138 HPSE2Q8WWQ2 592 aa18.02■□□□□ 0.47
GPC1-202ENST00000420138 CYYR1Q96J86 154 aa18.02■□□□□ 0.47
GPC1-202ENST00000420138 TRAF4Q9BUZ4 470 aaPredicted RBP18.02■□□□□ 0.47
GPC1-202ENST00000420138 SLC25A15Q9Y619 301 aa18.02■□□□□ 0.47
GPC1-202ENST00000420138 ITPR1Q14643 2758 aa18.02■□□□□ 0.47
GPC1-202ENST00000420138 FAM172BPA6NC97 362 aa18.01■□□□□ 0.47
GPC1-202ENST00000420138 FOXI3A8MTJ6 420 aaPredicted RBP18.01■□□□□ 0.47
GPC1-202ENST00000420138 SULT1C2O00338 296 aa18.01■□□□□ 0.47
GPC1-202ENST00000420138 PEX14O75381 377 aa18.01■□□□□ 0.47
GPC1-202ENST00000420138 CHRM2P08172 466 aa18.01■□□□□ 0.47
GPC1-202ENST00000420138 MELTFP08582 738 aa18.01■□□□□ 0.47
GPC1-202ENST00000420138 ZNF35P13682 527 aa18.01■□□□□ 0.47
GPC1-202ENST00000420138 ERP29P30040 261 aaKnown RBP18.01■□□□□ 0.47
GPC1-202ENST00000420138 TMEM50BP56557 158 aa18.01■□□□□ 0.47
GPC1-202ENST00000420138 PRDX4Q13162 271 aa18.01■□□□□ 0.47
GPC1-202ENST00000420138 PLAC9Q5JTB6 97 aa18.01■□□□□ 0.47
GPC1-202ENST00000420138 CSNK2A3Q8NEV1 391 aa18.01■□□□□ 0.47
GPC1-202ENST00000420138 OR5L1Q8NGL2 311 aa18.01■□□□□ 0.47
GPC1-202ENST00000420138 GIMAP1Q8WWP7 306 aa18.01■□□□□ 0.47
GPC1-202ENST00000420138 PAPOLGQ9BWT3 736 aaKnown RBP18.01■□□□□ 0.47
GPC1-202ENST00000420138 CST11Q9H112 138 aa18.01■□□□□ 0.47
GPC1-202ENST00000420138 CDH20Q9HBT6 801 aa18.01■□□□□ 0.47
GPC1-202ENST00000420138 IGKV1-12A0A0C4DH73 117 aa18■□□□□ 0.47
GPC1-202ENST00000420138 A0A0G2JNJ9 132 aa18■□□□□ 0.47
GPC1-202ENST00000420138 TMEM235A6NFC5 223 aa18■□□□□ 0.47
GPC1-202ENST00000420138 SOCS1O15524 211 aa18■□□□□ 0.47
GPC1-202ENST00000420138 SPRY1O43609 319 aaPredicted RBP18■□□□□ 0.47
GPC1-202ENST00000420138 ANGPTL7O43827 346 aa18■□□□□ 0.47
GPC1-202ENST00000420138 SCGNO76038 276 aa18■□□□□ 0.47
GPC1-202ENST00000420138 IGKV1D-12P01611 117 aa18■□□□□ 0.47
GPC1-202ENST00000420138 CSF1P09603 554 aa18■□□□□ 0.47
GPC1-202ENST00000420138 FAUP35544 74 aaKnown RBP18■□□□□ 0.47
GPC1-202ENST00000420138 ERVS71-1P61550 626 aa18■□□□□ 0.47
GPC1-202ENST00000420138 SSBP1Q04837 148 aaKnown RBP18■□□□□ 0.47
GPC1-202ENST00000420138 CDK10Q15131 360 aa18■□□□□ 0.47
GPC1-202ENST00000420138 CDNFQ49AH0 187 aa18■□□□□ 0.47
GPC1-202ENST00000420138 SPATA46Q5T0L3 261 aa18■□□□□ 0.47
GPC1-202ENST00000420138 FBXW12Q6X9E4 464 aa18■□□□□ 0.47
GPC1-202ENST00000420138 Q6ZTK2 550 aa18■□□□□ 0.47
GPC1-202ENST00000420138 TM2D1Q9BX74 207 aa18■□□□□ 0.47
GPC1-202ENST00000420138 SCPEP1Q9HB40 452 aa18■□□□□ 0.47
GPC1-202ENST00000420138 NKIRAS2Q9NYR9 191 aa18■□□□□ 0.47
GPC1-202ENST00000420138 Q9UFV3 132 aa18■□□□□ 0.47
GPC1-202ENST00000420138 ITGB1BP2Q9UKP3 347 aa18■□□□□ 0.47
GPC1-202ENST00000420138 SLC7A11Q9UPY5 501 aa18■□□□□ 0.47
GPC1-202ENST00000420138 PQLC2LA1A4F0 135 aa18■□□□□ 0.47
GPC1-202ENST00000420138 MEIS3P1A6NDR6 274 aa18■□□□□ 0.47
GPC1-202ENST00000420138 A8MXE2 369 aa18■□□□□ 0.47
GPC1-202ENST00000420138 RGS13O14921 159 aa18■□□□□ 0.47
GPC1-202ENST00000420138 PRAF2O60831 178 aa18■□□□□ 0.47
GPC1-202ENST00000420138 LPLP06858 475 aa18■□□□□ 0.47
GPC1-202ENST00000420138 CECR9P0C854 216 aa18■□□□□ 0.47
GPC1-202ENST00000420138 TMEM225BP0DP42 221 aa18■□□□□ 0.47
GPC1-202ENST00000420138 MGMTP16455 207 aa18■□□□□ 0.47
GPC1-202ENST00000420138 GZMKP49863 264 aa18■□□□□ 0.47
GPC1-202ENST00000420138 MRPL49Q13405 166 aaKnown RBP18■□□□□ 0.47
GPC1-202ENST00000420138 PCGF3Q3KNV8 242 aa18■□□□□ 0.47
GPC1-202ENST00000420138 CPNE2Q96FN4 548 aaPredicted RBP18■□□□□ 0.47
GPC1-202ENST00000420138 SELENOIQ9C0D9 397 aa18■□□□□ 0.47
GPC1-202ENST00000420138 KCNK7Q9Y2U2 307 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms