RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 VSIG4Q9Y279 399 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FRYLO94915 3013 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 MUC3AQ02505 3323 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 LINC00862A6NCI5 91 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 MCRIP1C9JLW8 97 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 TSC22D2O75157 780 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 TMEM225BP0DP42 221 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 LIPCP11150 499 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SERPINA2P20848 420 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ACKR3P25106 362 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 OR3A3P47888 321 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 OR3A2P47893 321 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 PPIAP62937 165 aaKnown RBP12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FAM3AP98173 230 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SPEM2Q0P670 501 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 OPCMLQ14982 345 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 NKPD1Q17RQ9 610 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 MICBQ29980 383 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 PLEKHN1Q494U1 663 aaPredicted RBP12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 PABPC1L2AQ5JQF8 200 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SFRP5Q5T4F7 317 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 CD163Q86VB7 1156 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SAXO1Q8IYX7 474 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 GVQW1Q8N7I0 195 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 OR5AP2Q8NGF4 316 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 PECRQ9BY49 303 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ZDHHC11Q9H8X9 412 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SLC7A10Q9NS82 523 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 TNRC6AQ8NDV7 1962 aaKnown RBP12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 MYO7BQ6PIF6 2116 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 A0A0D9SG52 128 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 C9orf170A2RU37 121 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ANKRD34BA5PLL1 514 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SLC25A4P12235 298 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ARG2P78540 354 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 PLP2Q04941 152 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 OR52W1Q6IF63 320 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 RFPL4BQ6ZWI9 263 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 CCDC36Q8IYA8 594 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 AKR7LQ8NHP1 331 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SLC6A15Q9H2J7 730 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 AUP1Q9Y679 476 aa12.65□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FAM166BA8MTA8 275 aa12.64□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ANOS1P23352 680 aa12.64□□□□□ -0.39
HLA-DPA1-242ENST00000419277 AP2S1P53680 142 aaPredicted RBP12.64□□□□□ -0.39
HLA-DPA1-242ENST00000419277 CHRFAM7AQ494W8 412 aa12.64□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ZNF766Q5HY98 468 aa12.64□□□□□ -0.39
HLA-DPA1-242ENST00000419277 EMG1Q92979 244 aaKnown RBP12.64□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ZNF775Q96BV0 537 aaPredicted RBP12.64□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ELL3Q9HB65 397 aaPredicted RBP12.64□□□□□ -0.39
HLA-DPA1-242ENST00000419277 GPR173Q9NS66 373 aa12.64□□□□□ -0.39
HLA-DPA1-242ENST00000419277 PLEKHJ1Q9NW61 149 aa12.64□□□□□ -0.39
HLA-DPA1-242ENST00000419277 KIF25Q9UIL4 384 aa12.64□□□□□ -0.39
HLA-DPA1-242ENST00000419277 GPR132Q9UNW8 380 aa12.64□□□□□ -0.39
HLA-DPA1-242ENST00000419277 A0A1B0GW55 424 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 FIGNL2A6NMB9 653 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 OR2AT4A6NND4 320 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 B3GALNT1O75752 331 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 OR2F2O95006 317 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 DUX4L2P0CJ85 424 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 DUX4L3P0CJ86 424 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 DUX4L4P0CJ87 422 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 DUX4L5P0CJ88 424 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 DUX4L6P0CJ89 424 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 DUX4L7P0CJ90 424 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 SNU13P55769 128 aaKnown RBP12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ARF1P84077 181 aaKnown RBP12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 HGFACQ04756 655 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 PPP1R1AQ13522 171 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 OR2F1Q13607 317 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 EXOSC2Q13868 293 aaKnown RBP12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 LY6G6FQ5SQ64 297 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 C3P1Q6ZMU1 363 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 OVCH2Q7RTZ1 564 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 TUSC5Q8IXB3 177 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 Q8NFD4 153 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 OR5D18Q8NGL1 313 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 OR2AE1Q8NHA4 323 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 COQ8AQ8NI60 647 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 FNDC9Q8TBE3 224 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 MRGPRFQ96AM1 343 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 VRK1Q99986 396 aaPredicted RBP12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 GSX2Q9BZM3 304 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 PPA2Q9H2U2 334 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 DUX4Q9UBX2 424 aa12.63□□□□□ -0.39
HLA-DPA1-242ENST00000419277 TRGV5A0A0B4J1U4 118 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 A0A1W2PP11 408 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 C5orf63A6NC05 138 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 DBX1A6NMT0 343 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 EFSO43281 561 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 SS18L1O75177 396 aaPredicted RBP12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 CNOT4O95628 575 aaKnown RBP12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 F10P00742 488 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 CST4P01036 141 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 CELA3AP09093 270 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 FTH1P19P0C7X4 201 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 MPGP29372 298 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 CALCRP30988 508 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ZNF92Q03936 586 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 SRYQ05066 204 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms