RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 TMEM176BQ3YBM2 270 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 COA6Q5JTJ3 125 aaKnown RBP7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 SP5Q6BEB4 398 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF519Q8TB69 540 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 WFIKKN2Q8TEU8 576 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF296Q8WUU4 475 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 ADAT3Q96EY9 351 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 CYYR1Q96J86 154 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 OR2M4Q96R27 311 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 RCL1Q9Y2P8 373 aaKnown RBP7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 CPAMD8Q8IZJ3 1885 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 A6NIZ1 184 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 C11orf98E9PRG8 122 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 SOX1O00570 391 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 SOX15O60248 233 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 MPIG6BO95866 241 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 FUT3P21217 361 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF93P35789 620 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 CCR4P51679 360 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 SNU13P55769 128 aaKnown RBP7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 RAP1BP61224 184 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 CSNK2A1P68400 391 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 HLA-DRB3P79483 266 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 FOXK1P85037 733 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 ARFRP1Q13795 201 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF77Q15935 545 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF506Q5JVG8 444 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 CARFQ8N187 725 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 GATSQ8NAP1 163 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 CSNK2A3Q8NEV1 391 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 OR1P1Q8NH06 330 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 C1orf147Q96MC9 270 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 HCFC1R1Q9NWW0 138 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 CRYM-AS1A6NIL9 109 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 CLDN34H7C241 214 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 HRKO00198 91 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 TK1P04183 234 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 CT45A8P0DMV1 189 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 CT45A9P0DMV2 189 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 FZD2Q14332 565 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 CT45A2Q5DJT8 189 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 TANGO2Q6ICL3 276 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 GALNTL5Q7Z4T8 443 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 BCORP1Q8N888 145 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 ARHGAP5-AS1Q96IT6 56 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 SYT3Q9BQG1 590 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 ST6GALNAC5Q9BVH7 336 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 OPN3Q9H1Y3 402 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 INSL6Q9Y581 213 aa7.07□□□□□ -1.28
HMGXB4-202ENST00000418170 NSG1A0A0A6YYJ2 146 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 XRCC2O43543 280 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 CDC14BO60729 498 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 C8AP07357 584 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 ECI1P42126 302 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 RPL27P61353 136 aaKnown RBP7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 MESP2Q0VG99 397 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 NOGQ13253 232 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 CD226Q15762 336 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 ACKR1Q16570 336 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 FNDC7Q5VTL7 733 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 GLIPR1L1Q6UWM5 242 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 SULF2Q8IWU5 870 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 CA13Q8N1Q1 262 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 OR4X1Q8NH49 305 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 KCNG3Q8TAE7 436 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF524Q96C55 264 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 VPS13AQ96RL7 3174 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 PRRT4C9JH25 899 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 MPZL1O95297 269 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 CXCL10P02778 98 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 NPSP0C0P6 89 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 ERVFC1-1P60608 527 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 IL13RA2Q14627 380 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 CBLN3Q6UW01 205 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 SLC35G3Q8N808 338 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 OR5D14Q8NGL3 314 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 FLVCR1-AS1Q8TAF5 88 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 DNASE2BQ8WZ79 361 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF558Q96NG5 402 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 ABHD14AQ9BUJ0 271 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 TMEM59Q9BXS4 323 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 HDAC8Q9BY41 377 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 MRPS28Q9Y2Q9 187 aaKnown RBP7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 DIRAS3O95661 229 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 APBB3O95704 486 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 BCKDHBP21953 392 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 GJA4P35212 333 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 FOXF1Q12946 379 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 SLC16A14Q7RTX9 510 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 RNF144BQ7Z419 303 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 THNSL2Q86YJ6 484 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 OR2G3Q8NGZ4 309 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 CBLN4Q9NTU7 201 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 AK3Q9UIJ7 227 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 A0A1B0GU03 582 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 TNFSF14O43557 240 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 CYB5R3P00387 301 aaPredicted RBP7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 TTRP02766 147 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 CTSDP07339 412 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms