RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	GBX2	P52951	348 aa	Predicted RBP	13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	PAX2	Q02962	417 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	IRF3	Q14653	427 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	FDX2	Q6P4F2	183 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	MRI1	Q9BV20	369 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	PAPOLG	Q9BWT3	736 aa	Known RBP	13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	ABCB9	Q9NP78	766 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	ERGIC3	Q9Y282	383 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	TANC2	Q9HCD6	1990 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	TRAV38-1	A0A0B4J264	116 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521		A6NLC8	198 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	ANXA2P2	A6NMY6	339 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	CST4	P01036	141 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	IGLV3-1	P01715	115 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	PAX8	Q06710	450 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	RNLS	Q5VYX0	342 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	WDR25	Q64LD2	544 aa	Predicted RBP	13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	LYPD2	Q6UXB3	125 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	BTNL3	Q6UXE8	466 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	ZNF841	Q6ZN19	808 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	ZNF826P	Q6ZT77	177 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	EGFL6	Q8IUX8	553 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	C11orf53	Q8IXP5	236 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	RDH10	Q8IZV5	341 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	GCSAM	Q8N6F7	178 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	C19orf18	Q8NEA5	215 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	OR1M1	Q8NGA1	313 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	RAB40A	Q8WXH6	277 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	DACT3	Q96B18	629 aa	Predicted RBP	13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	ITPKC	Q96DU7	683 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	MICU1	Q9BPX6	476 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	BABAM2	Q9NXR7	383 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	CLN8	Q9UBY8	286 aa		13.66	□□□□□ -0.22
DDR1-231	ENST00000417521	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.66	□□□□□ -0.22
DDR1-231	ENST00000417521		A0A1B0GTI1	187 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	OOEP	A6NGQ2	149 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	OR4C45	A6NMZ5	311 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	TNFRSF13B	O14836	293 aa	Predicted RBP	13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	VENTX	O95231	258 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	PPIAL4G	P0DN37	164 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	FPR2	P25090	351 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	ACKR3	P25106	362 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	CD80	P33681	288 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	CFHR2	P36980	270 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	MAP2K4	P45985	399 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	NPY4R	P50391	375 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	WNT4	P56705	351 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	GABARAPL2	P60520	117 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	ALKBH1	Q13686	389 aa	Known RBP	13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	KRT74	Q7RTS7	529 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	PRSS48	Q7RTY5	328 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	WDR86	Q86TI4	376 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	ZFP41	Q8N8Y5	198 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	BOLL	Q8N9W6	283 aa	Known RBP	13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	ZFAND2B	Q8WV99	257 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	OR5M11	Q96RB7	305 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	MND1	Q9BWT6	205 aa		13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.65	□□□□□ -0.22
DDR1-231	ENST00000417521	IGHV2-70D	A0A0C4DH43	119 aa		13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	KIR2DS1	A0A191URI9	304 aa		13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	hCG_1807616	A0A1W2PRN6	198 aa		13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	C3orf80	F5H4A9	247 aa		13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	ATP6V1B1	P15313	513 aa		13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	MAP2K3	P46734	347 aa		13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	TGM4	P49221	684 aa		13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	CCR9	P51686	369 aa		13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	HILS1	P60008	231 aa		13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	HOXA4	Q00056	320 aa	Predicted RBP	13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	MRPL28	Q13084	256 aa	Known RBP	13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	PRDX4	Q13162	271 aa		13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	TEX36	Q5VZQ5	186 aa		13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	SEMA6D	Q8NFY4	1073 aa		13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	JMJD8	Q96S16	334 aa		13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	RTL8A	Q9BWD3	113 aa		13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	SUCNR1	Q9BXA5	334 aa		13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	TLNRD1	Q9H1K6	362 aa		13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	PPP1R3E	Q9H7J1	279 aa		13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	LSM2	Q9Y333	95 aa	Known RBP	13.64	□□□□□ -0.23
DDR1-231	ENST00000417521	TRBV2	A0A0J9YWF9	115 aa		13.63	□□□□□ -0.23
DDR1-231	ENST00000417521	LOC107986453	A0A1B0GWG9	222 aa		13.63	□□□□□ -0.23
DDR1-231	ENST00000417521	ZNF850	A8MQ14	1090 aa		13.63	□□□□□ -0.23
DDR1-231	ENST00000417521	ZFPL1	O95159	310 aa		13.63	□□□□□ -0.23
DDR1-231	ENST00000417521	CDK5R1	Q15078	307 aa		13.63	□□□□□ -0.23
DDR1-231	ENST00000417521	ARMCX4	Q5H9R4	360 aa		13.63	□□□□□ -0.23
DDR1-231	ENST00000417521	FAM76B	Q5HYJ3	339 aa		13.63	□□□□□ -0.23
DDR1-231	ENST00000417521	RPL22L1	Q6P5R6	122 aa	Known RBP	13.63	□□□□□ -0.23
DDR1-231	ENST00000417521	WDR82	Q6UXN9	313 aa		13.63	□□□□□ -0.23
DDR1-231	ENST00000417521	BPIFB2	Q8N4F0	458 aa		13.63	□□□□□ -0.23
DDR1-231	ENST00000417521	OR10AC1	Q8NH08	325 aa		13.63	□□□□□ -0.23
DDR1-231	ENST00000417521	OR5P3	Q8WZ94	311 aa		13.63	□□□□□ -0.23
DDR1-231	ENST00000417521	PDCD1LG2	Q9BQ51	273 aa		13.63	□□□□□ -0.23
DDR1-231	ENST00000417521	NUP50	Q9UKX7	468 aa		13.63	□□□□□ -0.23
DDR1-231	ENST00000417521	PNMA8C	A0A1B0GUJ8	204 aa		13.62	□□□□□ -0.23
DDR1-231	ENST00000417521		A0A1B0GVI7	797 aa		13.62	□□□□□ -0.23
DDR1-231	ENST00000417521	TMEM210	A6NLX4	147 aa		13.62	□□□□□ -0.23
DDR1-231	ENST00000417521	CDIPT	O14735	213 aa		13.62	□□□□□ -0.23
DDR1-231	ENST00000417521	OGG1	O15527	345 aa		13.62	□□□□□ -0.23
DDR1-231	ENST00000417521	ADAM20	O43506	726 aa		13.62	□□□□□ -0.23

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