RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 CBY1Q9Y3M2 126 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 ZDBF2Q9HCK1 2354 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 ASXL3Q9C0F0 2248 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 MMP7P09237 267 aaPredicted RBP13□□□□□ -0.33
NCKIPSD-204ENST00000416649 TNFRSF4P43489 277 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 SP6Q3SY56 376 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 PLAC9Q5JTB6 97 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 NPSR1Q6W5P4 371 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 NKAIN3Q8N8D7 197 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 REEP6Q96HR9 211 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 FAM210BQ96KR6 192 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 OR2M4Q96R27 311 aa13□□□□□ -0.33
NCKIPSD-204ENST00000416649 PRSS38A1L453 326 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 RBFOX3A6NFN3 312 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 C9J4A7 227 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 HCRTR1O43613 425 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 RAD51DO75771 328 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 NUDT14O95848 222 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 ASAH2BP0C7U1 165 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 THEGLP0DJG4 465 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 PTGER4P35408 488 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 PPP1CAP62136 330 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 CD226Q15762 336 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 LANCL3Q6ZV70 420 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 MAMDC2Q7Z304 686 aaPredicted RBP12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 CYB561D1Q8N8Q1 229 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 ARHGAP5-AS1Q96IT6 56 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 OR2A5Q96R48 311 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 B3GALT5Q9Y2C3 310 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 HSPB2A8KAH6 182 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 ZNF878C9JN71 531 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 SYT7O43581 403 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 ZNF217O75362 1048 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 AHSA1O95433 338 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 GZMBP10144 247 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 APOBEC1P41238 236 aaKnown RBP12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 HSPB2Q16082 182 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 WBP2NLQ6ICG8 309 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 GLIPR1L1Q6UWM5 242 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 DCXRQ7Z4W1 244 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 C5orf24Q7Z6I8 188 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 SLC22A24Q8N4F4 322 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 RERGQ96A58 199 aaPredicted RBP12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 PTX4Q96A99 478 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 ADAT3Q96EY9 351 aaPredicted RBP12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 NIPSNAP3BQ9BS92 247 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 FOXQ1Q9C009 403 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 METTL9Q9H1A3 318 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 COA3Q9Y2R0 106 aaPredicted RBP12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 CELA2BP08218 269 aaPredicted RBP12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 SNU13P55769 128 aaKnown RBP12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 RND3P61587 244 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 HSD11B2P80365 405 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 ACKR1Q16570 336 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 PCK2Q16822 640 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 AADACL3Q5VUY0 350 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 SGPP2Q8IWX5 399 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 OR52N5Q8NH56 324 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 ZNF524Q96C55 264 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 ZNF701Q9NV72 531 aaPredicted RBP12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 PPP1R14DQ9NXH3 145 aa12.99□□□□□ -0.33
NCKIPSD-204ENST00000416649 A0A0A6YYD4 124 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 MKRN2OSH3BPM6 223 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 CRTAPO75718 401 aaPredicted RBP12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 OR5H8P0DN80 308 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 BCKDHBP21953 392 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 CXCR1P25024 350 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 ZNF93P35789 620 aaPredicted RBP12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 CD200P41217 278 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 SLC10A1Q14973 349 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 NKAIN1Q4KMZ8 207 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 ATG4DQ86TL0 474 aaPredicted RBP12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 PLPP5Q8NEB5 264 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 FAM3CQ92520 227 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 BMFQ96LC9 184 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 GABRG3Q99928 467 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 CBLN4Q9NTU7 201 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 HSF4Q9ULV5 492 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 R4GMQ9 66 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 H0YGG7 62 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 CYR61O00622 381 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 ZNF205O95201 554 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 PNMTP11086 282 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 GABRG2P18507 467 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 OMGP23515 440 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 ARF3P61204 181 aaPredicted RBP12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 INSM1Q01101 510 aaPredicted RBP12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 ZNF141Q15928 474 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 SLC22A25Q6T423 547 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 OR5D18Q8NGL1 313 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 RAB24Q969Q5 203 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 C8orf44Q96CB5 159 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 GPER1Q99527 375 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 LPAR5Q9H1C0 372 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 MMACHCQ9Y4U1 282 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 RP1P56715 2156 aa12.98□□□□□ -0.33
NCKIPSD-204ENST00000416649 PRSS37A4D1T9 235 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 TLCD2A6NGC4 264 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 RPL36A-HNRNPH2H7BZ11 118 aa12.97□□□□□ -0.33
NCKIPSD-204ENST00000416649 RPS2P15880 293 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms