RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 WDYHV1Q96HA8 205 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 NARS2Q96I59 477 aaKnown RBP10.13□□□□□ -0.79
RFFL-205ENST00000415395 SLC6A7Q99884 636 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 LINC00470Q9BZP3 86 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 PRDM14Q9GZV8 571 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 CGGBP1Q9UFW8 167 aaPredicted RBP10.13□□□□□ -0.79
RFFL-205ENST00000415395 NDRG3Q9UGV2 375 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 POLR1DQ9Y2S0 133 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 K7ENP7 123 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 PET100P0DJ07 73 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 FCGR2AP12318 317 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 CBX5P45973 191 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 MMP16P51512 607 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 PNLIPRP3Q17RR3 467 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 ZNF260Q3ZCT1 412 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 NRN1LQ496H8 165 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 PHYHD1Q5SRE7 291 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 AWAT2Q6E213 333 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 ELP2Q6IA86 826 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 INO80CQ6PI98 192 aaPredicted RBP10.13□□□□□ -0.79
RFFL-205ENST00000415395 SPAG16Q8N0X2 631 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 GPR137CQ8N3F9 429 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 RELL2Q8NC24 303 aaPredicted RBP10.13□□□□□ -0.79
RFFL-205ENST00000415395 OR5D14Q8NGL3 314 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 OR13C8Q8NGS7 320 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 OR10Z1Q8NGY1 313 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 ABHD3Q8WU67 409 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 PPP1R1CQ8WVI7 109 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 ARL11Q969Q4 196 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 SLAMF6Q96DU3 332 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 PRRG4Q9BZD6 226 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 NMES1Q9C002 83 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 KCNK15Q9H427 330 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 PLSCR2Q9NRY7 297 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 MBD2Q9UBB5 411 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 SPRR3Q9UBC9 169 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 SLC5A6Q9Y289 635 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 NOSIPQ9Y314 301 aaKnown RBP10.13□□□□□ -0.79
RFFL-205ENST00000415395 PRELID3BQ9Y3B1 194 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 LHFPL6Q9Y693 200 aa10.13□□□□□ -0.79
RFFL-205ENST00000415395 A0A0B4J2A0 478 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 TMEM235A6NFC5 223 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 FAM25EA8MYX2 175 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 ZNF878C9JN71 531 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 H7C2Y5 167 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 MRPL33O75394 65 aaKnown RBP10.12□□□□□ -0.79
RFFL-205ENST00000415395 FCER2P06734 321 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 GSTP1P09211 210 aaKnown RBP10.12□□□□□ -0.79
RFFL-205ENST00000415395 GNALP38405 381 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 UCNP55089 124 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 PMP22Q01453 160 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 PLEKHN1Q494U1 663 aaPredicted RBP10.12□□□□□ -0.79
RFFL-205ENST00000415395 ASPHD2Q6ICH7 369 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 LINC00346Q8IVM7 164 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 ACBD4Q8NC06 268 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 BPIFCQ8NFQ6 507 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 OR1M1Q8NGA1 313 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 RNF141Q8WVD5 230 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 FBXW5Q969U6 566 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 NABP1Q96AH0 204 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 TSNAXQ99598 290 aaKnown RBP10.12□□□□□ -0.79
RFFL-205ENST00000415395 MS4A7Q9GZW8 240 aaPredicted RBP10.12□□□□□ -0.79
RFFL-205ENST00000415395 BARX1Q9HBU1 254 aaPredicted RBP10.12□□□□□ -0.79
RFFL-205ENST00000415395 G6PC2Q9NQR9 355 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 SHPKQ9UHJ6 478 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 VSIG4Q9Y279 399 aa10.12□□□□□ -0.79
RFFL-205ENST00000415395 CACNA1CQ13936 2221 aa10.11□□□□□ -0.79
RFFL-205ENST00000415395 PHF3Q92576 2039 aaKnown RBP10.11□□□□□ -0.79
RFFL-205ENST00000415395 RNF222A6NCQ9 220 aa10.11□□□□□ -0.79
RFFL-205ENST00000415395 C5orf51A6NDU8 294 aa10.11□□□□□ -0.79
RFFL-205ENST00000415395 DNASE2O00115 360 aaPredicted RBP10.11□□□□□ -0.79
RFFL-205ENST00000415395 ZNF20P17024 532 aa10.11□□□□□ -0.79
RFFL-205ENST00000415395 VAMP1P23763 118 aa10.11□□□□□ -0.79
RFFL-205ENST00000415395 PSMB6P28072 239 aa10.11□□□□□ -0.79
RFFL-205ENST00000415395 CDAP32320 146 aa10.11□□□□□ -0.79
RFFL-205ENST00000415395 GRB2P62993 217 aaKnown RBP10.11□□□□□ -0.79
RFFL-205ENST00000415395 PPP1R1AQ13522 171 aa10.11□□□□□ -0.79
RFFL-205ENST00000415395 PABPC1L2AQ5JQF8 200 aa10.11□□□□□ -0.79
RFFL-205ENST00000415395 FAM27BQ5VT28 67 aa10.11□□□□□ -0.79
RFFL-205ENST00000415395 EIF5AL1Q6IS14 154 aaKnown RBP10.11□□□□□ -0.79
RFFL-205ENST00000415395 MCEMP1Q8IX19 187 aa10.11□□□□□ -0.79
RFFL-205ENST00000415395 ARRDC1Q8N5I2 433 aa10.11□□□□□ -0.79
RFFL-205ENST00000415395 GJC3Q8NFK1 279 aa10.11□□□□□ -0.79
RFFL-205ENST00000415395 FNDC9Q8TBE3 224 aa10.11□□□□□ -0.79
RFFL-205ENST00000415395 SARAFQ96BY9 339 aa10.11□□□□□ -0.79
RFFL-205ENST00000415395 RBM24Q9BX46 236 aaKnown RBP10.11□□□□□ -0.79
RFFL-205ENST00000415395 CHMP1AQ9HD42 196 aaPredicted RBP10.11□□□□□ -0.79
RFFL-205ENST00000415395 GLRX2Q9NS18 164 aa10.11□□□□□ -0.79
RFFL-205ENST00000415395 PURGQ9UJV8 347 aaKnown RBP10.11□□□□□ -0.79
RFFL-205ENST00000415395 KCNK7Q9Y2U2 307 aa10.11□□□□□ -0.79
RFFL-205ENST00000415395 TEX13DA0A0J9YY54 714 aaPredicted RBP10.1□□□□□ -0.79
RFFL-205ENST00000415395 RPL36A-HNRNPH2H7BZ11 118 aa10.1□□□□□ -0.79
RFFL-205ENST00000415395 RAB27BO00194 218 aa10.1□□□□□ -0.79
RFFL-205ENST00000415395 SYT7O43581 403 aa10.1□□□□□ -0.79
RFFL-205ENST00000415395 NDUFA2O43678 99 aa10.1□□□□□ -0.79
RFFL-205ENST00000415395 ATG12O94817 140 aa10.1□□□□□ -0.79
RFFL-205ENST00000415395 SLC34A2O95436 690 aa10.1□□□□□ -0.79
RFFL-205ENST00000415395 CSN2P05814 226 aa10.1□□□□□ -0.79
RFFL-205ENST00000415395 CTSSP25774 331 aa10.1□□□□□ -0.79
RFFL-205ENST00000415395 NTF4P34130 210 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms