RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 ELMOD3Q96FG2 381 aa13.43□□□□□ -0.26
SHMT2-202ENST00000414700 OR14A2Q96R54 314 aa13.43□□□□□ -0.26
SHMT2-202ENST00000414700 SAV1Q9H4B6 383 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-202ENST00000414700 ERRFI1Q9UJM3 462 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-202ENST00000414700 ROS1P08922 2347 aa13.43□□□□□ -0.26
SHMT2-202ENST00000414700 UBR5O95071 2799 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-202ENST00000414700 SPTAN1Q13813 2472 aaKnown RBP13.43□□□□□ -0.26
SHMT2-202ENST00000414700 A0A1B0GUH1 482 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 PLSCR5A0PG75 271 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 DNASE2O00115 360 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-202ENST00000414700 PDCD5O14737 125 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 ALDOBP05062 364 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 CXCL2P19875 107 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 CALCRP30988 508 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 HOXA1P49639 335 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-202ENST00000414700 PRSS12P56730 875 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 TIMM23BQ5SRD1 257 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 DPPA2Q7Z7J5 298 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 CCDC36Q8IYA8 594 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 EIF4E3Q8N5X7 224 aaKnown RBP13.42□□□□□ -0.26
SHMT2-202ENST00000414700 SLC30A7Q8NEW0 376 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 OR51E1Q8TCB6 317 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 ELOVL5Q9NYP7 299 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 PLCE1Q9P212 2302 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 ACOD1A6NK06 481 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 C16orf97H3BN30 126 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 LGALS8O00214 317 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 GMDSO60547 372 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 ZG16O60844 167 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 PEX14O75381 377 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 SOX2P48431 317 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 PITPNAQ00169 270 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 C4orf17Q53FE4 359 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 ACSM3Q53FZ2 586 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 DRAM2Q6UX65 266 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 ZNF101Q8IZC7 436 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 OR2AE1Q8NHA4 323 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 COMMD4Q9H0A8 199 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 C20orf85Q9H1P6 137 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 OR51B6Q9H340 312 aa13.42□□□□□ -0.26
SHMT2-202ENST00000414700 HCFC1P51610 2035 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 LOC107986453A0A1B0GWG9 222 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 ANKRD61A6NGH8 418 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 GPRIN2O60269 458 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 LMX1BO60663 402 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 RGS11O94810 467 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 NGFP01138 241 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 HPXP02790 462 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 LCATP04180 440 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 CD1AP06126 327 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 CD3GP09693 182 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 COX5BP10606 129 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 CBR1P16152 277 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 CD53P19397 219 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 WNT5AP41221 380 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 MMP15P51511 669 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 SFXN4Q6P4A7 337 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 STPG2Q8N412 459 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 LINC00469Q8N7U9 141 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 TRMT10AQ8TBZ6 339 aaKnown RBP13.41□□□□□ -0.26
SHMT2-202ENST00000414700 CA5BP1Q8WTZ4 195 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 PGAM5Q96HS1 289 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 LYZL4Q96KX0 146 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 TMPRSS13Q9BYE2 586 aa13.41□□□□□ -0.26
SHMT2-202ENST00000414700 A6NIN4 97 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 MPTX1A8MV57 137 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 MT-ND4P03905 459 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 GIPP09681 153 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-202ENST00000414700 CECR9P0C854 216 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 APLNRP35414 380 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 ASCL1P50553 236 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 DYRK1AQ13627 763 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 SLC25A35Q3KQZ1 300 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 CEACAM19Q7Z692 300 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 STEAP2Q8NFT2 490 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 COQ8AQ8NI60 647 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 MOB1AQ9H8S9 216 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 GPR84Q9NQS5 396 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 AMDHD2Q9Y303 409 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 UTP20O75691 2785 aaKnown RBP13.4□□□□□ -0.26
SHMT2-202ENST00000414700 ICE1Q9Y2F5 2266 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 IGHV1-18A0A0C4DH31 117 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 A0A1B0GTI1 187 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 PIN1P1O15428 100 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 IGLV1-44P01699 117 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 ISG15P05161 165 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 DGCR2P98153 550 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 KLF9Q13886 244 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-202ENST00000414700 PPA1Q15181 289 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 METTL11BQ5VVY1 283 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 TPRA1Q86W33 373 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 SPICQ8N5J4 248 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 C1QTNF5Q9BXJ0 243 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 OBP2BQ9NPH6 170 aa13.4□□□□□ -0.26
SHMT2-202ENST00000414700 ZNF879B4DU55 563 aa13.39□□□□□ -0.27
SHMT2-202ENST00000414700 GSTZ1O43708 216 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-202ENST00000414700 RP2O75695 350 aa13.39□□□□□ -0.27
SHMT2-202ENST00000414700 APOC1P02654 83 aa13.39□□□□□ -0.27
SHMT2-202ENST00000414700 UBCP0CG48 685 aaKnown RBP13.39□□□□□ -0.27
SHMT2-202ENST00000414700 EPXP11678 715 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms