RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 GPR173Q9NS66 373 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 NLKQ9UBE8 527 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 SLC7A11Q9UPY5 501 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 V9GYS6 101 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 A0A1B0GTI1 187 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 LOC100130705A0A1B0GUX0 176 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 ANKRD61A6NGH8 418 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 A6NIN4 97 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 OR2AT4A6NND4 320 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 H3BSH0 61 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.29□□□□□ -0.92
RFFL-204ENST00000414419 RHBDL1O75783 438 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 SERPINA3P01011 423 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 HAAOP46952 286 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 BPIFB3P59826 476 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 ARF6P62330 175 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 IL13RA1P78552 427 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 ZSCAN26Q16670 478 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 ATPAF1Q5TC12 328 aaPredicted RBP9.29□□□□□ -0.92
RFFL-204ENST00000414419 ACBD7Q8N6N7 88 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 FAM216BQ8N7L0 139 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 SIGLECL1Q8N7X8 197 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.29□□□□□ -0.92
RFFL-204ENST00000414419 FAM216AQ8WUB2 273 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 AQP3Q92482 292 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 H1FXQ92522 213 aaKnown RBP9.29□□□□□ -0.92
RFFL-204ENST00000414419 GCDHQ92947 438 aaPredicted RBP9.29□□□□□ -0.92
RFFL-204ENST00000414419 FGF23Q9GZV9 251 aaPredicted RBP9.29□□□□□ -0.92
RFFL-204ENST00000414419 CNTD2Q9H8S5 307 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 ACOXLQ9NUZ1 547 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 RASL12Q9NYN1 266 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.29□□□□□ -0.92
RFFL-204ENST00000414419 RPUSD1Q9UJJ7 312 aaKnown RBP9.29□□□□□ -0.92
RFFL-204ENST00000414419 POLDIP2Q9Y2S7 368 aa9.29□□□□□ -0.92
RFFL-204ENST00000414419 A0A1B0GW55 424 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 FAM230AA0A1W2PPH8 454 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 GATBO75879 557 aaKnown RBP9.28□□□□□ -0.92
RFFL-204ENST00000414419 FADS2O95864 444 aaKnown RBP9.28□□□□□ -0.92
RFFL-204ENST00000414419 PLATP00750 562 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 HTR1AP08908 422 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 UBCP0CG48 685 aaKnown RBP9.28□□□□□ -0.92
RFFL-204ENST00000414419 DUX4L2P0CJ85 424 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 DUX4L3P0CJ86 424 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 DUX4L4P0CJ87 422 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 DUX4L5P0CJ88 424 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 DUX4L6P0CJ89 424 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 DUX4L7P0CJ90 424 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 NDUFB7P17568 137 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 CCL1P22362 96 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 TGM4P49221 684 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 ACTA2P62736 377 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 ACTG2P63267 376 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 ELF3P78545 371 aaPredicted RBP9.28□□□□□ -0.92
RFFL-204ENST00000414419 BAMBIQ13145 260 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 PDCD1Q15116 288 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 SMIM21Q3B7S5 101 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 TMEM244Q5VVB8 128 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 TMEM42Q69YG0 159 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 STUMQ69YW2 141 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 DUX4L9Q6RFH8 374 aaPredicted RBP9.28□□□□□ -0.92
RFFL-204ENST00000414419 C12orf54Q6X4T0 127 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 ENTHD1Q8IYW4 607 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 CMTM4Q8IZR5 234 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 BCL6BQ8N143 479 aaPredicted RBP9.28□□□□□ -0.92
RFFL-204ENST00000414419 ANGPTL6Q8NI99 470 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 ZDHHC16Q969W1 377 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 WDFY2Q96P53 400 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 FAM118AQ9NWS6 357 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 SMPD3Q9NY59 655 aaPredicted RBP9.28□□□□□ -0.92
RFFL-204ENST00000414419 ONECUT1Q9UBC0 465 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 DUX4Q9UBX2 424 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 SLC25A10Q9UBX3 287 aaPredicted RBP9.28□□□□□ -0.92
RFFL-204ENST00000414419 AASSQ9UDR5 926 aa9.28□□□□□ -0.92
RFFL-204ENST00000414419 EXOGQ9Y2C4 368 aaKnown RBP9.28□□□□□ -0.92
RFFL-204ENST00000414419 LOC107986453A0A1B0GWG9 222 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 PQLC2LA1A4F0 135 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 E9PQ18 207 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 J3QLW9 94 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 J3QT63 122 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 HAX1O00165 279 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 SLC16A6O15403 523 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 NXPH2O95156 264 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 SFTPBP07988 381 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 ACAA1P09110 424 aaPredicted RBP9.27□□□□□ -0.93
RFFL-204ENST00000414419 OCM2P0CE71 109 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 OCMP0CE72 109 aaPredicted RBP9.27□□□□□ -0.93
RFFL-204ENST00000414419 DBTP11182 482 aaKnown RBP9.27□□□□□ -0.93
RFFL-204ENST00000414419 ZNF19P17023 458 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 CAPZA1P52907 286 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 OR12D2P58182 307 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 ISL1P61371 349 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 UBA52P62987 128 aaKnown RBP9.27□□□□□ -0.93
RFFL-204ENST00000414419 ZNF91Q05481 1191 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 CNN3Q15417 329 aaKnown RBP9.27□□□□□ -0.93
RFFL-204ENST00000414419 CDONQ4KMG0 1287 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 KLHL22Q53GT1 634 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 BRD3OSQ6XYD6 125 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 ACP7Q6ZNF0 438 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 ZNF788Q6ZQV5 615 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 Q6ZSR3 168 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms