RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 SMN1Q16637 294 aaKnown RBP12.29□□□□□ -0.44
CHD1-202ENST00000414220 C11orf91Q3C1V1 193 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 CCDC58Q4VC31 144 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 IL17RELQ6ZVW7 336 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 STX19Q8N4C7 294 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 OR5AK2Q8NH90 309 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 TFAP2CQ92754 450 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 TMIGD2Q96BF3 282 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 BORCS8Q96FH0 119 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 DNTTIP1Q9H147 329 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 RASL12Q9NYN1 266 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 NKX1-2Q9UD57 310 aaPredicted RBP12.29□□□□□ -0.44
CHD1-202ENST00000414220 ZANQ9Y493 2812 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 LOC105371242A0A075B767 164 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 FAM230AA0A1W2PPH8 454 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 A6NIN4 97 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 H3BSH0 61 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 GPR37O15354 613 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 PHF1O43189 567 aaPredicted RBP12.28□□□□□ -0.44
CHD1-202ENST00000414220 AKR7A2O43488 359 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 ECDO95905 644 aaPredicted RBP12.28□□□□□ -0.44
CHD1-202ENST00000414220 CYB5AP00167 134 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 LIPFP07098 398 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 PRKACBP22694 351 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 ZFP36P26651 326 aaKnown RBP12.28□□□□□ -0.44
CHD1-202ENST00000414220 RBMXP38159 391 aaKnown RBP12.28□□□□□ -0.44
CHD1-202ENST00000414220 KIR3DL2P43630 455 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 HSPA13P48723 471 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 TGM4P49221 684 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 SEC61A1P61619 476 aaKnown RBP12.28□□□□□ -0.44
CHD1-202ENST00000414220 WDR25Q64LD2 544 aaPredicted RBP12.28□□□□□ -0.44
CHD1-202ENST00000414220 RPL22L1Q6P5R6 122 aaKnown RBP12.28□□□□□ -0.44
CHD1-202ENST00000414220 LYPD2Q6UXB3 125 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 RDH10Q8IZV5 341 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 OR13C3Q8NGS6 347 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 RAB40AQ8WXH6 277 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 MED30Q96HR3 178 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 CHST5Q9GZS9 411 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 ISG20L2Q9H9L3 353 aaKnown RBP12.28□□□□□ -0.44
CHD1-202ENST00000414220 SCN3BQ9NY72 215 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 CNOT2Q9NZN8 540 aaKnown RBP12.28□□□□□ -0.44
CHD1-202ENST00000414220 KAAG1Q9UBP8 84 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 INSIG2Q9Y5U4 225 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 AUP1Q9Y679 476 aa12.28□□□□□ -0.44
CHD1-202ENST00000414220 FN1P02751 2386 aaKnown RBP12.28□□□□□ -0.44
CHD1-202ENST00000414220 SETD2Q9BYW2 2564 aaPredicted RBP12.27□□□□□ -0.44
CHD1-202ENST00000414220 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.27□□□□□ -0.44
CHD1-202ENST00000414220 IGHV3OR15-7A0A075B7D8 119 aa12.27□□□□□ -0.45
CHD1-202ENST00000414220 TRBV2A0A0J9YWF9 115 aa12.27□□□□□ -0.45
CHD1-202ENST00000414220 J3QT63 122 aa12.27□□□□□ -0.45
CHD1-202ENST00000414220 NDUFB3O43676 98 aa12.27□□□□□ -0.45
CHD1-202ENST00000414220 ENSAO43768 121 aaKnown RBP12.27□□□□□ -0.45
CHD1-202ENST00000414220 PIPP12273 146 aaPredicted RBP12.27□□□□□ -0.45
CHD1-202ENST00000414220 EGR1P18146 543 aa12.27□□□□□ -0.45
CHD1-202ENST00000414220 ATP1B3P54709 279 aa12.27□□□□□ -0.45
CHD1-202ENST00000414220 NANOS3P60323 173 aaKnown RBP12.27□□□□□ -0.45
CHD1-202ENST00000414220 GMFBP60983 142 aa12.27□□□□□ -0.45
CHD1-202ENST00000414220 ST3GAL4Q11206 333 aa12.27□□□□□ -0.45
CHD1-202ENST00000414220 LRRC10Q5BKY1 277 aa12.27□□□□□ -0.45
CHD1-202ENST00000414220 FAM90A1Q86YD7 464 aa12.27□□□□□ -0.45
CHD1-202ENST00000414220 PNLDC1Q8NA58 520 aaKnown RBP12.27□□□□□ -0.45
CHD1-202ENST00000414220 BPIFB6Q8NFQ5 453 aa12.27□□□□□ -0.45
CHD1-202ENST00000414220 AQP3Q92482 292 aa12.27□□□□□ -0.45
CHD1-202ENST00000414220 FGGYQ96C11 551 aa12.27□□□□□ -0.45
CHD1-202ENST00000414220 PKIBQ9C010 78 aa12.27□□□□□ -0.45
CHD1-202ENST00000414220 PLCXD1Q9NUJ7 323 aa12.27□□□□□ -0.45
CHD1-202ENST00000414220 BABAM2Q9NXR7 383 aa12.27□□□□□ -0.45
CHD1-202ENST00000414220 NLKQ9UBE8 527 aa12.27□□□□□ -0.45
CHD1-202ENST00000414220 NSD1Q96L73 2696 aaPredicted RBP12.26□□□□□ -0.45
CHD1-202ENST00000414220 IGHV2-70DA0A0C4DH43 119 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 PQLC2LA1A4F0 135 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 OR4C45A6NMZ5 311 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 TRAPPC2LH3BP13 241 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 MYL12BO14950 172 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 CD2P06729 351 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 LIMS3P0CW19 117 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 LIMS4P0CW20 117 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 FPR2P25090 351 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 RBP2P50120 134 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 SMIM21Q3B7S5 101 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 ARMCX4Q5H9R4 360 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 UTS2BQ765I0 119 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 C1QL2Q7Z5L3 287 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 SERPINA12Q8IW75 414 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 DNAAF1Q8NEP3 725 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 OR5D14Q8NGL3 314 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 OR52N1Q8NH53 320 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 TRMT10AQ8TBZ6 339 aaKnown RBP12.26□□□□□ -0.45
CHD1-202ENST00000414220 TSEN15Q8WW01 171 aaKnown RBP12.26□□□□□ -0.45
CHD1-202ENST00000414220 GGHQ92820 318 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 SPSB1Q96BD6 273 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 CPNE2Q96FN4 548 aaPredicted RBP12.26□□□□□ -0.45
CHD1-202ENST00000414220 CCL13Q99616 98 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 NUDT16L1Q9BRJ7 211 aaKnown RBP12.26□□□□□ -0.45
CHD1-202ENST00000414220 TMPRSS13Q9BYE2 586 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 MMP26Q9NRE1 261 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 DHDHQ9UQ10 334 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 MALRD1Q5VYJ5 2156 aa12.26□□□□□ -0.45
CHD1-202ENST00000414220 NIPBLQ6KC79 2804 aaeCLIP12.25□□□□□ -0.45
CHD1-202ENST00000414220 KIR2DS1A0A191URI9 304 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms