RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 LSM11P83369 360 aaKnown RBP eCLIP8.27□□□□□ -1.08
SNHG3-201ENST00000413987 OR2F1Q13607 317 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 ZNF345Q14585 488 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 DEFB134Q4QY38 66 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 PAN3Q58A45 887 aaKnown RBP8.27□□□□□ -1.08
SNHG3-201ENST00000413987 C10orf91Q5T1B1 145 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 FAM90A2PQ658T7 463 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 SLC23A3Q6PIS1 610 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 FAM214BQ7L5A3 538 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 SLC36A1Q7Z2H8 476 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 ADGRE4PQ86SQ3 457 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 METTL27Q8N6F8 245 aaPredicted RBP8.27□□□□□ -1.08
SNHG3-201ENST00000413987 TMEM99Q8N816 258 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 CCDC71LQ8N9Z2 235 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 LGALS14Q8TCE9 139 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 TMEM171Q8WVE6 324 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 MAFIPQ8WZ33 124 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 PIGTQ969N2 578 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 MS4A6EQ96DS6 147 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 PGLYRP3Q96LB9 341 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 WFIKKN1Q96NZ8 548 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 ALX4Q9H161 411 aaPredicted RBP8.27□□□□□ -1.08
SNHG3-201ENST00000413987 ACSS1Q9NUB1 689 aaPredicted RBP8.27□□□□□ -1.08
SNHG3-201ENST00000413987 GAR1Q9NY12 217 aaKnown RBP8.27□□□□□ -1.08
SNHG3-201ENST00000413987 TAS2R8Q9NYW2 309 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 ZNF629Q9UEG4 869 aaPredicted RBP8.27□□□□□ -1.08
SNHG3-201ENST00000413987 PILRAQ9UKJ1 303 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 PPIAL4AQ9Y536 164 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 RALGAPA1Q6GYQ0 2036 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 J3QLW9 94 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 GPR31O00270 319 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 UCHL1P09936 223 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 GLB1P16278 677 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 ZNF19P17023 458 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 CD1CP29017 333 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 SSR2P43308 183 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 LCN2P80188 198 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 TBC1D26Q86UD7 250 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 IZUMO1Q8IYV9 350 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 KCNRGQ8N5I3 272 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 MFSD9Q8NBP5 474 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 OR2L5Q8NG80 312 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 OR4C6Q8NH72 309 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 C2CD4CQ8TF44 421 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 GHSRQ92847 366 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 CMSS1Q9BQ75 279 aaKnown RBP8.27□□□□□ -1.09
SNHG3-201ENST00000413987 MCRIP2Q9BUT9 160 aaKnown RBP8.27□□□□□ -1.09
SNHG3-201ENST00000413987 SERTAD3Q9UJW9 196 aa8.27□□□□□ -1.09
SNHG3-201ENST00000413987 LILRA5A6NI73 299 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 CRYBA1P05813 215 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 MELTFP08582 738 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 TBXA2RP21731 343 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 MTCP1P56278 107 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 CLDN6P56747 220 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 ACKR1Q16570 336 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 RNF212Q495C1 297 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 BTNL8Q6UX41 500 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 NPSR1Q6W5P4 371 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 MBOAT2Q6ZWT7 520 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 SYT9Q86SS6 491 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 IL22RA1Q8N6P7 574 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 OR52L1Q8NGH7 329 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 OR5AN1Q8NGI8 311 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 OR14L1PQ8NHC6 308 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 TNFAIP8L1Q8WVP5 186 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 ZG16BQ96DA0 208 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 TBX5Q99593 518 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 ARHGDIGQ99819 225 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 CCDC3Q9BQI4 270 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 SEMA6CQ9H3T2 930 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 LOC400499M0QZD8 3231 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 OR6C68A6NDL8 312 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 A6NNC1 897 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 BCL2L11O43521 198 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 XRCC2O43543 280 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 RDH16O75452 317 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 EPPINO95925 133 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 VSIG10L2P0DP72 767 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 BMP7P18075 431 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 AHRP35869 848 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 RPS15AP62244 130 aaKnown RBP8.26□□□□□ -1.09
SNHG3-201ENST00000413987 BTN3A2P78410 334 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 BLOC1S1P78537 153 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 TLE3Q04726 772 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 TCF15Q12870 199 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 ECH1Q13011 328 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 ACER2Q5QJU3 275 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 TMEM69Q5SWH9 247 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 OR4C11Q6IEV9 310 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 FAM199XQ6PEV8 388 aaPredicted RBP8.26□□□□□ -1.09
SNHG3-201ENST00000413987 S100A7AQ86SG5 101 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 MEX3DQ86XN8 651 aaKnown RBP8.26□□□□□ -1.09
SNHG3-201ENST00000413987 CCDC107Q8WV48 283 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 MRPL48Q96GC5 212 aaKnown RBP8.26□□□□□ -1.09
SNHG3-201ENST00000413987 NIT2Q9NQR4 276 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 PRDM7Q9NQW5 492 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 KLK11Q9UBX7 282 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 MMP24Q9Y5R2 645 aa8.26□□□□□ -1.09
SNHG3-201ENST00000413987 A0A1W2PPQ1 181 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 SIGLEC5O15389 551 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms