RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 OR5A2Q8NGI9 324 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 OR8S1Q8NH09 359 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 TMEM171Q8WVE6 324 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 FAM46BQ96A09 425 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 S100A16Q96FQ6 103 aaKnown RBP5.68□□□□□ -1.5
VPS41-204ENST00000413141 RADILQ96JH8 1075 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 HIST1H2AAQ96QV6 131 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 ABHD1Q96SE0 405 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 RTL8AQ9BWD3 113 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 TMEM59Q9BXS4 323 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 CST11Q9H112 138 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 NGBQ9NPG2 151 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 IL36GQ9NZH8 169 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 MYEF2Q9P2K5 600 aaKnown RBP5.68□□□□□ -1.5
VPS41-204ENST00000413141 RABL2AQ9UBK7 228 aaPredicted RBP5.68□□□□□ -1.5
VPS41-204ENST00000413141 FZR1Q9UM11 496 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 RABL2BQ9UNT1 228 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 NOP16Q9Y3C1 178 aaKnown RBP5.68□□□□□ -1.5
VPS41-204ENST00000413141 COL6A6A6NMZ7 2263 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 ZFYVE26Q68DK2 2539 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 RTTNQ86VV8 2226 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 A0A0A6YYD4 124 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 A0A0A6YYH2 397 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 IGKV1-12A0A0C4DH73 117 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.67□□□□□ -1.5
VPS41-204ENST00000413141 A0A1B0GWJ7 208 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 A0A1W2PP11 408 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 A6NJ64 397 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 VGLL3A8MV65 326 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 ZNF732B4DXR9 585 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 CTDSPLO15194 276 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 MLNRO43193 412 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 XRCC3O43542 346 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 SPRY1O43609 319 aaPredicted RBP5.67□□□□□ -1.5
VPS41-204ENST00000413141 ANGPTL7O43827 346 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 CRTAPO75718 401 aaPredicted RBP5.67□□□□□ -1.5
VPS41-204ENST00000413141 MPIG6BO95866 241 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 IGKV1D-12P01611 117 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 IGHV3-13P01766 116 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 HLA-DQB1P01920 261 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 CSF3P09919 207 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 TMEM225BP0DP42 221 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 IL7P13232 177 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 MGMTP16455 207 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 SERPINA2P20848 420 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 HAAOP46952 286 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 PTH2RP49190 550 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 KLF3P57682 345 aaPredicted RBP5.67□□□□□ -1.5
VPS41-204ENST00000413141 RPS27AP62979 156 aaKnown RBP5.67□□□□□ -1.5
VPS41-204ENST00000413141 GNG3P63215 75 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 PITPNAQ00169 270 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 PDZK1IP1Q13113 114 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 RSU1Q15404 277 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 OR8G1Q15617 311 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 BAK1Q16611 211 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 SLC22A6Q4U2R8 563 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 STEAP3Q658P3 488 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 ADAM5Q6NVV9 412 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 VHLLQ6RSH7 139 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 SLC22A25Q6T423 547 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 ASCL4Q6XD76 172 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 Q6ZR03 302 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 SLC25A26Q70HW3 274 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 WDR86Q86TI4 376 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 CDH24Q86UP0 819 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 LRP11Q86VZ4 500 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 LYSMD2Q8IV50 215 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 Q8N402 240 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 ZSCAN4Q8NAM6 433 aaPredicted RBP5.67□□□□□ -1.5
VPS41-204ENST00000413141 ACBD4Q8NC06 268 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 PXT1Q8NFP0 134 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 OR10AD1Q8NGE0 317 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 OR10K1Q8NGX5 313 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 KCNG3Q8TAE7 436 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 LINC01560Q8TB33 94 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 SMIM4Q8WVI0 70 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 TRIM63Q969Q1 353 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 MRPL24Q96A35 216 aaKnown RBP5.67□□□□□ -1.5
VPS41-204ENST00000413141 PLPPR2Q96GM1 343 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 RNF170Q96K19 258 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 S100A13Q99584 98 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 GAL3ST1Q99999 423 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 MICU1Q9BPX6 476 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 SYT3Q9BQG1 590 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 NUDT16L1Q9BRJ7 211 aaKnown RBP5.67□□□□□ -1.5
VPS41-204ENST00000413141 NICN1Q9BSH3 213 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 MRPL37Q9BZE1 423 aaKnown RBP5.67□□□□□ -1.5
VPS41-204ENST00000413141 SLC22A4Q9H015 551 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 METTL9Q9H1A3 318 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 LPAR5Q9H1C0 372 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 ATG5Q9H1Y0 275 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 BANF2Q9H503 90 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 ESRP2Q9H6T0 727 aaKnown RBP5.67□□□□□ -1.5
VPS41-204ENST00000413141 ZNF442Q9H7R0 627 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 ABCB10Q9NRK6 738 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 CA10Q9NS85 328 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 C14orf119Q9NWQ9 140 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 NDRG3Q9UGV2 375 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 RAB22AQ9UL26 194 aa5.67□□□□□ -1.5
VPS41-204ENST00000413141 ING4Q9UNL4 249 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms