RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 PRR15LQ9BU68 103 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 KCNE5Q9UJ90 142 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 SLC27A5Q9Y2P5 690 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.14□□□□□ -1.75
PTPN13-202ENST00000411767 PGPA6NDG6 321 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 MYOD1P15172 320 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 WASP42768 502 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 CYB561P49447 251 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 MAJINQ3KP22 176 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 SPNS3Q6ZMD2 512 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 POP1Q99575 1024 aaKnown RBP4.14□□□□□ -1.75
PTPN13-202ENST00000411767 HDHD3Q9BSH5 251 aaPredicted RBP4.14□□□□□ -1.75
PTPN13-202ENST00000411767 VN1R1Q9GZP7 353 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 MAGT1Q9H0U3 335 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 ABCC2Q92887 1545 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 TCRBV9S1A1TA0A576 114 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 GALR3O60755 368 aaPredicted RBP4.14□□□□□ -1.75
PTPN13-202ENST00000411767 CD14P08571 375 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 ADMP35318 185 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 RASL11AQ6T310 242 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 DTX1Q86Y01 620 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 TBC1D10CQ8IV04 446 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 ZADH2Q8N4Q0 377 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 PELI1Q96FA3 418 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 SYT17Q9BSW7 474 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 PRDM13Q9H4Q3 707 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 MRPL42Q9Y6G3 142 aaKnown RBP4.14□□□□□ -1.75
PTPN13-202ENST00000411767 PXMP4Q9Y6I8 212 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 PZPP20742 1482 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 POM121BA6NF01 834 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 SFTA3P0C7M3 94 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 EGR2P11161 476 aaPredicted RBP4.14□□□□□ -1.75
PTPN13-202ENST00000411767 HBBP68871 147 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 SSBP1Q04837 148 aaKnown RBP4.14□□□□□ -1.75
PTPN13-202ENST00000411767 XKR7Q5GH72 579 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 CYB5R2Q6BCY4 276 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 ZNF322Q6U7Q0 402 aaPredicted RBP4.14□□□□□ -1.75
PTPN13-202ENST00000411767 LSM10Q969L4 123 aaKnown RBP4.14□□□□□ -1.75
PTPN13-202ENST00000411767 BIRC7Q96CA5 298 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 CBLCQ9ULV8 474 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 A0A1W2PPI3 338 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 YDJCA8MPS7 323 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 A8MWV9 139 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 ZNF487B1APH4 448 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 FAM72CH0Y354 149 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 H3BML4 177 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 K7ESF4 209 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 LANCL1O43813 399 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 PPP1R3DO95685 299 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 NPPBP16860 134 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 MFAP5Q13361 173 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 LRRC75BQ2VPJ9 315 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 RTP2Q5QGT7 225 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 C9orf50Q5SZB4 431 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 FAM72DQ6L9T8 149 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 CGB2Q6NT52 195 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 AGTRAPQ6RW13 159 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 OR13A1Q8NGR1 328 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 TMIGD2Q96BF3 282 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 SLC35B3Q9H1N7 401 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 SERGEFQ9UGK8 458 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 RCE1Q9Y256 329 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 ST3GAL6Q9Y274 331 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 ARAP3Q8WWN8 1544 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 GYPCP04921 128 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 C1QTNF9P0C862 333 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 SRFP11831 508 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 BMP2P12643 396 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 FOLR2P14207 255 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 GM2AP17900 193 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 VDAC1P21796 283 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 CRYBB3P26998 211 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 ELAVL3Q14576 367 aaKnown RBP4.14□□□□□ -1.75
PTPN13-202ENST00000411767 DUSP5Q16690 384 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 TSPO2Q5TGU0 170 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 ANKRD37Q7Z713 158 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 MS4A4EQ96PG1 132 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 HHIPQ96QV1 700 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 NDUFAF3Q9BU61 184 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 WNT5BQ9H1J7 359 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 TMEM59LQ9UK28 342 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 NTNG1Q9Y2I2 539 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 TBL2Q9Y4P3 447 aaKnown RBP4.14□□□□□ -1.75
PTPN13-202ENST00000411767 ATP23Q9Y6H3 246 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 PLXNC1O60486 1568 aa4.14□□□□□ -1.75
PTPN13-202ENST00000411767 TRAV17A0A0B4J275 112 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 CXCL11O14625 94 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 BUD23O43709 281 aaKnown RBP4.13□□□□□ -1.75
PTPN13-202ENST00000411767 PHLDA2Q53GA4 152 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 FAM78BQ5VT40 261 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 SYT11Q9BT88 431 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 PLA2R1Q13018 1463 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 USP6P35125 1406 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 MANSC4A6NHS7 340 aaPredicted RBP4.13□□□□□ -1.75
PTPN13-202ENST00000411767 DLL1O00548 723 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 NDUFB3O43676 98 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 APOMO95445 188 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 F13BP05160 661 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 HTN1P15515 57 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 ACHEP22303 614 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms