RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 ADAM20O43506 726 aa13.6□□□□□ -0.23
NOD1-202ENST00000411552 NDUFA2O43678 99 aa13.6□□□□□ -0.23
NOD1-202ENST00000411552 RHBDL1O75783 438 aa13.6□□□□□ -0.23
NOD1-202ENST00000411552 ISG15P05161 165 aa13.6□□□□□ -0.23
NOD1-202ENST00000411552 MUC1P15941 1255 aaPredicted RBP13.6□□□□□ -0.23
NOD1-202ENST00000411552 DCKP27707 260 aa13.6□□□□□ -0.23
NOD1-202ENST00000411552 SRP14P37108 136 aaKnown RBP13.6□□□□□ -0.23
NOD1-202ENST00000411552 ETV1P50549 477 aa13.6□□□□□ -0.23
NOD1-202ENST00000411552 GMFBP60983 142 aa13.6□□□□□ -0.23
NOD1-202ENST00000411552 ALKBH1Q13686 389 aaKnown RBP13.6□□□□□ -0.23
NOD1-202ENST00000411552 MICBQ29980 383 aa13.6□□□□□ -0.23
NOD1-202ENST00000411552 TMEM244Q5VVB8 128 aa13.6□□□□□ -0.23
NOD1-202ENST00000411552 LAIR2Q6ISS4 152 aa13.6□□□□□ -0.23
NOD1-202ENST00000411552 HAGHLQ6PII5 290 aaPredicted RBP13.6□□□□□ -0.23
NOD1-202ENST00000411552 FBLIM1Q8WUP2 373 aa13.6□□□□□ -0.23
NOD1-202ENST00000411552 C7orf69Q9H7B7 122 aa13.6□□□□□ -0.23
NOD1-202ENST00000411552 CLN8Q9UBY8 286 aa13.6□□□□□ -0.23
NOD1-202ENST00000411552 DIMT1Q9UNQ2 313 aaKnown RBP13.6□□□□□ -0.23
NOD1-202ENST00000411552 LOC105371242A0A075B767 164 aa13.59□□□□□ -0.23
NOD1-202ENST00000411552 H0YHG0 523 aa13.59□□□□□ -0.23
NOD1-202ENST00000411552 ZNF12P17014 697 aa13.59□□□□□ -0.23
NOD1-202ENST00000411552 AQP4P55087 323 aa13.59□□□□□ -0.23
NOD1-202ENST00000411552 PAX2Q02962 417 aa13.59□□□□□ -0.23
NOD1-202ENST00000411552 WDR25Q64LD2 544 aaPredicted RBP13.59□□□□□ -0.23
NOD1-202ENST00000411552 OR10AC1Q8NH08 325 aa13.59□□□□□ -0.23
NOD1-202ENST00000411552 AQP3Q92482 292 aa13.59□□□□□ -0.23
NOD1-202ENST00000411552 CHST5Q9GZS9 411 aa13.59□□□□□ -0.23
NOD1-202ENST00000411552 SMURF1Q9HCE7 757 aa13.59□□□□□ -0.23
NOD1-202ENST00000411552 ERVK-18Q9QC07 812 aa13.59□□□□□ -0.23
NOD1-202ENST00000411552 OPN4Q9UHM6 478 aa13.59□□□□□ -0.23
NOD1-202ENST00000411552 INSIG2Q9Y5U4 225 aa13.59□□□□□ -0.23
NOD1-202ENST00000411552 H0YJX3 145 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 TMPRSS2O15393 492 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 IFNA2P01563 188 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 ADRA2CP18825 462 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 HAAOP46952 286 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 GBX2P52951 348 aaPredicted RBP13.58□□□□□ -0.24
NOD1-202ENST00000411552 MRPL28Q13084 256 aaKnown RBP13.58□□□□□ -0.24
NOD1-202ENST00000411552 UBE2V2Q15819 145 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 ZNF573Q86YE8 665 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 ZNF676Q8N7Q3 588 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 OR5T2Q8NGG2 359 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 OR51A4Q8NGJ6 313 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 ZNF671Q8TAW3 534 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 TRMT10AQ8TBZ6 339 aaKnown RBP13.58□□□□□ -0.24
NOD1-202ENST00000411552 NPRL2Q8WTW4 380 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 GGHQ92820 318 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 DACT3Q96B18 629 aaPredicted RBP13.58□□□□□ -0.24
NOD1-202ENST00000411552 C12orf43Q96C57 262 aaKnown RBP13.58□□□□□ -0.24
NOD1-202ENST00000411552 C10orf35Q96D05 121 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 ADAT3Q96EY9 351 aaPredicted RBP13.58□□□□□ -0.24
NOD1-202ENST00000411552 TMEM80Q96HE8 168 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 TECTBQ96PL2 329 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 CCL13Q99616 98 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 RASSF4Q9H2L5 321 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 SNTG1Q9NSN8 517 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 DNAJB11Q9UBS4 358 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 HHLA2Q9UM44 414 aa13.58□□□□□ -0.24
NOD1-202ENST00000411552 CAB39Q9Y376 341 aaPredicted RBP13.58□□□□□ -0.24
NOD1-202ENST00000411552 FBN1P35555 2871 aaKnown RBP13.58□□□□□ -0.24
NOD1-202ENST00000411552 IGHV2-70DA0A0C4DH43 119 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 A0A1B0GW55 424 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 J3QT63 122 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 SYNGR1O43759 233 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 XPNPEP2O43895 674 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 FCN3O75636 299 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 GATBO75879 557 aaKnown RBP13.57□□□□□ -0.24
NOD1-202ENST00000411552 ZFPL1O95159 310 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 DUX4L2P0CJ85 424 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 DUX4L3P0CJ86 424 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 DUX4L4P0CJ87 422 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 DUX4L5P0CJ88 424 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 DUX4L6P0CJ89 424 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 DUX4L7P0CJ90 424 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 MYL12AP19105 171 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 TGM4P49221 684 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 NPY4RP50391 375 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 GTF2A1P52655 376 aaPredicted RBP13.57□□□□□ -0.24
NOD1-202ENST00000411552 ST3GAL4Q11206 333 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 OR2G6Q5TZ20 316 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 STUMQ69YW2 141 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 DUX4L9Q6RFH8 374 aaPredicted RBP13.57□□□□□ -0.24
NOD1-202ENST00000411552 C1QL2Q7Z5L3 287 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 OR13C3Q8NGS6 347 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 RAB40AQ8WXH6 277 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 PP6455Q8WZ26 134 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 FGGYQ96C11 551 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 PDCD1LG2Q9BQ51 273 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 KAAG1Q9UBP8 84 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 DUX4Q9UBX2 424 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 CLEC2DQ9UHP7 191 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 SLC7A11Q9UPY5 501 aa13.57□□□□□ -0.24
NOD1-202ENST00000411552 EXOSC1Q9Y3B2 195 aaKnown RBP13.57□□□□□ -0.24
NOD1-202ENST00000411552 FAM230AA0A1W2PPH8 454 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 EFCAB10A6NFE3 127 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 TMEM212A6NML5 194 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 C22orf46C9J442 243 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 SERPINA3P01011 423 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 TFF1P04155 84 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 CCDC159P0C7I6 412 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms