RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ELAC2Q9BQ52 826 aaKnown RBP11.54□□□□□ -0.56
HLA-DQB2-229ENST00000411527 MAP2K3P46734 347 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 RAB13P51153 203 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 ERVFRD-1P60508 538 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 RPL31P62899 125 aaKnown RBP11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 MICAQ29983 383 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 CEACAM21Q3KPI0 293 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 PLA1AQ53H76 456 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 CEP78Q5JTW2 689 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 CYP2R1Q6VVX0 501 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 THAP5Q7Z6K1 395 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 LHFPL4Q7Z7J7 247 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 NDUFA11Q86Y39 141 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 PGAM4Q8N0Y7 254 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 CD177Q8N6Q3 437 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 OR4M1Q8NGD0 313 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 OR8B12Q8NGG6 310 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 OR2T27Q8NH04 317 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 OTOSQ8NHW6 89 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 FAM81AQ8TBF8 368 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 AQP3Q92482 292 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 PHF21AQ96BD5 680 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 CITED2Q99967 270 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 DGCR6LQ9BY27 220 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 OR51V1Q9H2C8 321 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 TAS2R1Q9NYW7 299 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 U3KQV3 271 aa11.53□□□□□ -0.56
HLA-DQB2-229ENST00000411527 hCG_1809904A0A1W2PP81 198 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 A0A1W2PPE2 198 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 A0A1W2PR64 198 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 A0A1W2PRV1 198 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 RFPL4AA6NLU0 287 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 RFPL4AL1F8VTS6 287 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 SELENOFO60613 162 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 PEX14O75381 377 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 MTRF1O75570 445 aaKnown RBP11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 CCL3L1P16619 93 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 FOXB2Q5VYV0 432 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 HAGHLQ6PII5 290 aaPredicted RBP11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 CCBE1Q6UXH8 406 aaPredicted RBP11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 MOB3CQ70IA8 216 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 DYNAPQ8N1N2 210 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 Q8N2B8 174 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 IQCF1Q8N6M8 205 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 ZNF454Q8N9F8 522 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 OR5A2Q8NGI9 324 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 TEX47Q8TBZ9 253 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 OR5M11Q96RB7 305 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 RASL12Q9NYN1 266 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 USE1Q9NZ43 259 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 LRP12Q9Y561 859 aa11.52□□□□□ -0.57
HLA-DQB2-229ENST00000411527 FAM90A8PA6NJQ4 464 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 ADARB2-AS1A8MUL3 147 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 VGLL3A8MV65 326 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 SLC1A7O00341 560 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 PAICSP22234 425 aaKnown RBP11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 PRDX2P32119 198 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 MAGEA2P43356 314 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 PSMA6P60900 246 aaKnown RBP11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 CNN3Q15417 329 aaKnown RBP11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 ZNF782Q6ZMW2 699 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 ACP7Q6ZNF0 438 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 TMEM219Q86XT9 240 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 ZNF561Q8N587 486 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 ZNF488Q96MN9 340 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 PRSS22Q9GZN4 317 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 C1orf21Q9H246 121 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 NIPAL2Q9H841 368 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 REEP1Q9H902 201 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 ABCB10Q9NRK6 738 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 VNN3Q9NY84 501 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 TCF19Q9Y242 345 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 KLHDC2Q9Y2U9 406 aa11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 SAMHD1Q9Y3Z3 626 aaKnown RBP11.51□□□□□ -0.57
HLA-DQB2-229ENST00000411527 A6NDX4 124 aa11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 OR5B21A6NL26 309 aa11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 PRR23D1E9PI22 279 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 H3BN98 237 aa11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 MPIG6BO95866 241 aa11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 PRR23D2P0DMB1 279 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 FAHP16930 419 aa11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 ATP6V1B2P21281 511 aa11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 CEBPDP49716 269 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 SMIM21Q3B7S5 101 aa11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 ARSJQ5FYB0 599 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 VAX1Q5SQQ9 334 aa11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 PLCXD3Q63HM9 321 aa11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 PLBD1Q6P4A8 553 aa11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 KRT74Q7RTS7 529 aa11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 KRT77Q7Z794 578 aa11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 DEFB107AQ8IZN7 70 aa11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 POC1AQ8NBT0 407 aa11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 RPS4Y2Q8TD47 263 aa11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 WIPF2Q8TF74 440 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 NIPSNAP1Q9BPW8 284 aa11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 CDCA4Q9BXL8 241 aa11.5□□□□□ -0.57
HLA-DQB2-229ENST00000411527 GSC2O15499 205 aa11.49□□□□□ -0.57
HLA-DQB2-229ENST00000411527 ARG1P05089 322 aa11.49□□□□□ -0.57
HLA-DQB2-229ENST00000411527 PIPP12273 146 aaPredicted RBP11.49□□□□□ -0.57
HLA-DQB2-229ENST00000411527 IGLL1P15814 213 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms