RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 NAT2P11245 290 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 RAB6AP20340 208 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 SCN1BQ07699 218 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 ZNF718Q3SXZ3 478 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 RGS7BPQ6MZT1 257 aaPredicted RBP10.66□□□□□ -0.7
CHMP3-204ENST00000409727 SLC25A26Q70HW3 274 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 ZNF611Q8N823 705 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 CHST4Q8NCG5 386 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 OR10AD1Q8NGE0 317 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 KCNG3Q8TAE7 436 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 OR5P3Q8WZ94 311 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 USB1Q9BQ65 265 aaKnown RBP10.66□□□□□ -0.7
CHMP3-204ENST00000409727 CST11Q9H112 138 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 MRPL15Q9P015 296 aaKnown RBP10.66□□□□□ -0.7
CHMP3-204ENST00000409727 ERRFI1Q9UJM3 462 aaPredicted RBP10.66□□□□□ -0.7
CHMP3-204ENST00000409727 PURGQ9UJV8 347 aaKnown RBP10.66□□□□□ -0.7
CHMP3-204ENST00000409727 TBC1D24Q9ULP9 559 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 SPEF1Q9Y4P9 236 aa10.66□□□□□ -0.7
CHMP3-204ENST00000409727 SMG1Q96Q15 3661 aaKnown RBP10.65□□□□□ -0.7
CHMP3-204ENST00000409727 IGKV1-12A0A0C4DH73 117 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 MEIOCA2RUB1 952 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 MEIS3P1A6NDR6 274 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 IQCF6A8MYZ5 107 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 H0YL77 283 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 IGKV1D-12P01611 117 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 CSTBP04080 98 aaKnown RBP10.65□□□□□ -0.7
CHMP3-204ENST00000409727 PRB1P04280 392 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 FCER2P06734 321 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 MGMTP16455 207 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 SELEP16581 610 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 SRP9P49458 86 aaKnown RBP10.65□□□□□ -0.7
CHMP3-204ENST00000409727 DEFA1P59665 94 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 DEFA3P59666 94 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 PDZK1IP1Q13113 114 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 MSMPQ1L6U9 139 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 TRIM16LQ309B1 348 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 C3orf36Q3SXR2 165 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 TMEM108Q6UXF1 575 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 KRT74Q7RTS7 529 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 OR2W3Q7Z3T1 314 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 RTN4RL2Q86UN3 420 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 CENPSQ8N2Z9 138 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 OR51T1Q8NGJ9 327 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 OR51F2Q8NH61 342 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 LILRB4Q8NHJ6 448 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 PTX4Q96A99 478 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 HS3ST6Q96QI5 342 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 SYT3Q9BQG1 590 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 ADAT1Q9BUB4 502 aaKnown RBP10.65□□□□□ -0.7
CHMP3-204ENST00000409727 SELENOIQ9C0D9 397 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 METTL9Q9H1A3 318 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 MSL2Q9HCI7 577 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 ELF5Q9UKW6 265 aaPredicted RBP10.65□□□□□ -0.7
CHMP3-204ENST00000409727 MPC1Q9Y5U8 109 aa10.65□□□□□ -0.7
CHMP3-204ENST00000409727 A0A0A6YYD4 124 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 A0A1B0GUH1 482 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 ISPDA4D126 451 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 ABCD4O14678 606 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 SSX4O60224 188 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 MNDAP41218 407 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 GUCA2AQ02747 115 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 BSPH1Q075Z2 132 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 OR8G1Q15617 311 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 SLC22A25Q6T423 547 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 LRP11Q86VZ4 500 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 OR5A2Q8NGI9 324 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 OR52I2Q8NH67 350 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 LINC01560Q8TB33 94 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 FCAMRQ8WWV6 532 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 YIPF5Q969M3 257 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 TRIM63Q969Q1 353 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 SLAMF9Q96A28 289 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 CYYR1Q96J86 154 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 LPAR5Q9H1C0 372 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 GHRLQ9UBU3 117 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 DPRXA6NFQ7 191 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 RAB27BO00194 218 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 SOCS1O15524 211 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 SFTPBP07988 381 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 GNB3P16520 340 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 ALDH3B1P43353 468 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 MBNL2Q5VZF2 373 aaKnown RBP10.64□□□□□ -0.71
CHMP3-204ENST00000409727 HAGHLQ6PII5 290 aaPredicted RBP10.64□□□□□ -0.71
CHMP3-204ENST00000409727 OR8G5Q8NG78 346 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 SMIM4Q8WVI0 70 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 RNASE6Q93091 150 aaKnown RBP10.64□□□□□ -0.71
CHMP3-204ENST00000409727 URM1Q9BTM9 101 aaKnown RBP10.64□□□□□ -0.71
CHMP3-204ENST00000409727 KCNJ16Q9NPI9 418 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 TMEM100Q9NV29 134 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 FBLN5Q9UBX5 448 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 KLK11Q9UBX7 282 aa10.64□□□□□ -0.71
CHMP3-204ENST00000409727 TMEM235A6NFC5 223 aa10.63□□□□□ -0.71
CHMP3-204ENST00000409727 WIPF3A6NGB9 483 aa10.63□□□□□ -0.71
CHMP3-204ENST00000409727 C3orf80F5H4A9 247 aa10.63□□□□□ -0.71
CHMP3-204ENST00000409727 PPP3CBP16298 524 aa10.63□□□□□ -0.71
CHMP3-204ENST00000409727 GABRR1P24046 479 aa10.63□□□□□ -0.71
CHMP3-204ENST00000409727 PTAFRP25105 342 aa10.63□□□□□ -0.71
CHMP3-204ENST00000409727 RANBP1P43487 201 aa10.63□□□□□ -0.71
CHMP3-204ENST00000409727 NPBWR2P48146 333 aa10.63□□□□□ -0.71
CHMP3-204ENST00000409727 SNU13P55769 128 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms