RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 A0A1B0GTI1 187 aa16.18■□□□□ 0.18
TSPAN4-209ENST00000409543 KRT8P05787 483 aa16.18■□□□□ 0.18
TSPAN4-209ENST00000409543 GLRA1P23415 457 aa16.18■□□□□ 0.18
TSPAN4-209ENST00000409543 DMRTC1Q5HYR2 192 aa16.18■□□□□ 0.18
TSPAN4-209ENST00000409543 ZNF684Q5T5D7 378 aa16.18■□□□□ 0.18
TSPAN4-209ENST00000409543 RUSC1-AS1Q66K80 236 aa16.18■□□□□ 0.18
TSPAN4-209ENST00000409543 TMEM42Q69YG0 159 aa16.18■□□□□ 0.18
TSPAN4-209ENST00000409543 PLEKHG7Q6ZR37 379 aa16.18■□□□□ 0.18
TSPAN4-209ENST00000409543 Q6ZSR3 168 aa16.18■□□□□ 0.18
TSPAN4-209ENST00000409543 CCDC121Q6ZUS5 278 aa16.18■□□□□ 0.18
TSPAN4-209ENST00000409543 SSX6Q7RTT6 188 aa16.18■□□□□ 0.18
TSPAN4-209ENST00000409543 RFKQ969G6 155 aa16.18■□□□□ 0.18
TSPAN4-209ENST00000409543 EME1Q96AY2 570 aa16.18■□□□□ 0.18
TSPAN4-209ENST00000409543 DCTN5Q9BTE1 182 aa16.18■□□□□ 0.18
TSPAN4-209ENST00000409543 IGHV1-69DA0A0B4J2H0 117 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 A0A1W2PQL4 384 aaPredicted RBP16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 OR2AT4A6NND4 320 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 DHRS7CA6NNS2 312 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 H3BNX3 289 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 DLGAP1O14490 977 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 HOXA3O43365 443 aaPredicted RBP16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 SULT1C4O75897 302 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 IGHV1-69P01742 117 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 ACAA1P09110 424 aaPredicted RBP16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 CDC42P60953 191 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 IL13RA1P78552 427 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 KPNB1Q14974 876 aaKnown RBP16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 CLVS2Q5SYC1 327 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 ZFP1Q6P2D0 407 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 HAGHLQ6PII5 290 aaPredicted RBP16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 Q6YL49 198 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 KIR3DL3Q8N743 410 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 YIPF7Q8N8F6 280 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 OR14K1Q8NGZ2 314 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 C8orf46Q8TAG6 207 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 TRUB1Q8WWH5 349 aaKnown RBP16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 LHX4Q969G2 390 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 TMIGD2Q96BF3 282 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 GAFA1Q96PS6 74 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 TBX5Q99593 518 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 ACOXLQ9NUZ1 547 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 RASL12Q9NYN1 266 aa16.17■□□□□ 0.18
TSPAN4-209ENST00000409543 A0A1B0GVI7 797 aa16.16■□□□□ 0.18
TSPAN4-209ENST00000409543 METTL15A6NJ78 407 aa16.16■□□□□ 0.18
TSPAN4-209ENST00000409543 SIGLEC5O15389 551 aa16.16■□□□□ 0.18
TSPAN4-209ENST00000409543 RPP14O95059 124 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-209ENST00000409543 ALPLP05186 524 aa16.16■□□□□ 0.18
TSPAN4-209ENST00000409543 SELLP14151 372 aa16.16■□□□□ 0.18
TSPAN4-209ENST00000409543 ATP6V1E1P36543 226 aa16.16■□□□□ 0.18
TSPAN4-209ENST00000409543 DGUOKQ16854 277 aa16.16■□□□□ 0.18
TSPAN4-209ENST00000409543 C16orf87Q6PH81 154 aa16.16■□□□□ 0.18
TSPAN4-209ENST00000409543 CMTM4Q8IZR5 234 aa16.16■□□□□ 0.18
TSPAN4-209ENST00000409543 OR10H4Q8NGA5 316 aa16.16■□□□□ 0.18
TSPAN4-209ENST00000409543 USE1Q9NZ43 259 aa16.16■□□□□ 0.18
TSPAN4-209ENST00000409543 ONECUT1Q9UBC0 465 aa16.16■□□□□ 0.18
TSPAN4-209ENST00000409543 SLC25A10Q9UBX3 287 aaPredicted RBP16.16■□□□□ 0.18
TSPAN4-209ENST00000409543 SLC22A13Q9Y226 551 aa16.16■□□□□ 0.18
TSPAN4-209ENST00000409543 IGKV1D-17A0A075B6S4 117 aa16.15■□□□□ 0.18
TSPAN4-209ENST00000409543 APOL3O95236 402 aa16.15■□□□□ 0.18
TSPAN4-209ENST00000409543 TFF1P04155 84 aa16.15■□□□□ 0.18
TSPAN4-209ENST00000409543 PSG2P11465 335 aa16.15■□□□□ 0.18
TSPAN4-209ENST00000409543 CCL1P22362 96 aa16.15■□□□□ 0.18
TSPAN4-209ENST00000409543 GABRA2P47869 451 aa16.15■□□□□ 0.18
TSPAN4-209ENST00000409543 CAV3P56539 151 aa16.15■□□□□ 0.18
TSPAN4-209ENST00000409543 VMO1Q7Z5L0 202 aa16.15■□□□□ 0.18
TSPAN4-209ENST00000409543 CATSPERDQ86XM0 798 aa16.15■□□□□ 0.18
TSPAN4-209ENST00000409543 ZNF573Q86YE8 665 aa16.15■□□□□ 0.18
TSPAN4-209ENST00000409543 C10orf67Q8IYJ2 551 aa16.15■□□□□ 0.18
TSPAN4-209ENST00000409543 POC1AQ8NBT0 407 aa16.15■□□□□ 0.18
TSPAN4-209ENST00000409543 H1FXQ92522 213 aaKnown RBP16.15■□□□□ 0.18
TSPAN4-209ENST00000409543 HRASLS5Q96KN8 279 aa16.15■□□□□ 0.18
TSPAN4-209ENST00000409543 IMPAD1Q9NX62 359 aa16.15■□□□□ 0.18
TSPAN4-209ENST00000409543 ZNF222Q9UK12 451 aa16.15■□□□□ 0.18
TSPAN4-209ENST00000409543 ORC6Q9Y5N6 252 aa16.15■□□□□ 0.18
TSPAN4-209ENST00000409543 PQLC2LA1A4F0 135 aa16.14■□□□□ 0.17
TSPAN4-209ENST00000409543 EI24O14681 340 aa16.14■□□□□ 0.17
TSPAN4-209ENST00000409543 SLC25A30Q5SVS4 291 aa16.14■□□□□ 0.17
TSPAN4-209ENST00000409543 METAP1DQ6UB28 335 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-209ENST00000409543 TMEM86BQ8N661 226 aa16.14■□□□□ 0.17
TSPAN4-209ENST00000409543 RORBQ92753 470 aa16.14■□□□□ 0.17
TSPAN4-209ENST00000409543 ZNF747Q9BV97 191 aa16.14■□□□□ 0.17
TSPAN4-209ENST00000409543 GPR173Q9NS66 373 aa16.14■□□□□ 0.17
TSPAN4-209ENST00000409543 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.14■□□□□ 0.172e-6■■■■□ 23.8
TSPAN4-209ENST00000409543 E9PQ18 207 aa16.13■□□□□ 0.17
TSPAN4-209ENST00000409543 J3QT63 122 aa16.13■□□□□ 0.17
TSPAN4-209ENST00000409543 NOS1APO75052 506 aaPredicted RBP16.13■□□□□ 0.17
TSPAN4-209ENST00000409543 MELTFP08582 738 aa16.13■□□□□ 0.17
TSPAN4-209ENST00000409543 PGA5P0DJD9 388 aa16.13■□□□□ 0.17
TSPAN4-209ENST00000409543 HAAOP46952 286 aa16.13■□□□□ 0.17
TSPAN4-209ENST00000409543 ALDH3A2P51648 485 aa16.13■□□□□ 0.17
TSPAN4-209ENST00000409543 ACP7Q6ZNF0 438 aa16.13■□□□□ 0.17
TSPAN4-209ENST00000409543 C1orf122Q6ZSJ8 110 aa16.13■□□□□ 0.17
TSPAN4-209ENST00000409543 CCDC54Q8NEL0 328 aa16.13■□□□□ 0.17
TSPAN4-209ENST00000409543 UBE2FQ969M7 185 aa16.13■□□□□ 0.17
TSPAN4-209ENST00000409543 SDSLQ96GA7 329 aa16.13■□□□□ 0.17
TSPAN4-209ENST00000409543 POLDIP2Q9Y2S7 368 aa16.13■□□□□ 0.17
TSPAN4-209ENST00000409543 MAB21L2Q9Y586 359 aa16.13■□□□□ 0.17
TSPAN4-209ENST00000409543 POMT1Q9Y6A1 747 aa16.13■□□□□ 0.17
TSPAN4-209ENST00000409543 A6NIN4 97 aa16.12■□□□□ 0.17
TSPAN4-209ENST00000409543 SYNGR1O43759 233 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms