RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 RER1O15258 196 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 AKR7A2O43488 359 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 TSC22D2O75157 780 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 DHRS3O75911 302 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 HPNP05981 417 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 PTHLHP12272 177 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 NFYAP23511 347 aaPredicted RBP11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 AGTR1P30556 359 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 ALDH3B1P43353 468 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 TAS2R31P59538 309 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 SNRPD2P62316 118 aaKnown RBP11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 GUCA2AQ02747 115 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 PLA2G7Q13093 441 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 GK2Q14410 553 aaPredicted RBP11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 RAB35Q15286 201 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 KRTCAP3Q53RY4 240 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 RIPPLY2Q5TAB7 128 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 C11orf88Q6PI97 169 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 DRAM2Q6UX65 266 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 C3P1Q6ZMU1 363 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 IDO2Q6ZQW0 420 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 Q6ZSR3 168 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 TRAPPC6BQ86SZ2 158 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 YRDCQ86U90 279 aaKnown RBP11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 TMEM17Q86X19 198 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 TGIF2LYQ8IUE0 185 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 WDFY1Q8IWB7 410 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 TMEM123Q8N131 208 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 FTMTQ8N4E7 242 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 C12orf45Q8N5I9 185 aaPredicted RBP11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 OR14K1Q8NGZ2 314 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 OR8S1Q8NH09 359 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 OR2V1Q8NHB1 315 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 CPNE4Q96A23 557 aaPredicted RBP11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 FAM71F1Q96KD3 344 aaPredicted RBP11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 LDAHQ9H6V9 325 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 ACKR4Q9NPB9 350 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 PCDHB16Q9NRJ7 776 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 UBQLN2Q9UHD9 624 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 FOXD3Q9UJU5 478 aaPredicted RBP11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 MAB21L2Q9Y586 359 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 V9GYS6 101 aa11.25□□□□□ -0.61
SMARCB1-203ENST00000407082 ZNF814B7Z6K7 855 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 L7N2F9 121 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 M0R233 179 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 RAB27BO00194 218 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 TNFSF11O14788 317 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 ZNHIT1O43257 154 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 CA11O75493 328 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 VSIG8P0DPA2 414 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 SLC6A9P48067 706 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 ZNF81P51508 661 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 ZP1P60852 638 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 UBE2MP61081 183 aaKnown RBP11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 QRFPP83859 136 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 NRN1LQ496H8 165 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 WIPI1Q5MNZ9 446 aaPredicted RBP11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 GLIPR1L1Q6UWM5 242 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 Q71RC1 249 aaPredicted RBP11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 AAED1Q7RTV5 226 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 NAA40Q86UY6 237 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 ACBD4Q8NC06 268 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 TMEM59Q9BXS4 323 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 RGCCQ9H4X1 137 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 TMEM165Q9HC07 324 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 RHBDD3Q9Y3P4 386 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 NCKAP5O14513 1909 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 ABCA4P78363 2273 aa11.24□□□□□ -0.61
SMARCB1-203ENST00000407082 TRGV5A0A0B4J1U4 118 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 A0A1B0GW55 424 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 ANKRD34BA5PLL1 514 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 M0R135 149 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 LMX1BO60663 402 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 SLC22A5O76082 557 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 FARS2O95363 451 aaKnown RBP11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 IGLV3-1P01715 115 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 IGHG3P01860 377 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 FCER2P06734 321 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 OR4E1P0C645 316 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 DUX4L2P0CJ85 424 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 DUX4L3P0CJ86 424 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 DUX4L4P0CJ87 422 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 DUX4L5P0CJ88 424 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 DUX4L6P0CJ89 424 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 DUX4L7P0CJ90 424 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 ABOP16442 354 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 PRKACBP22694 351 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 OTX1P32242 354 aaPredicted RBP11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 SELENOPP49908 381 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 B3GALT5-AS1P59052 145 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 ENDOGQ14249 297 aaKnown RBP11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 LGALSLQ3ZCW2 172 aaPredicted RBP11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 FAAP20Q6NZ36 180 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 ZNF680Q8NEM1 530 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 RAB3CQ96E17 227 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 ZNF799Q96GE5 643 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 TECTBQ96PL2 329 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 CHIAQ9BZP6 476 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 SLC6A15Q9H2J7 730 aa11.23□□□□□ -0.61
SMARCB1-203ENST00000407082 POFUT1Q9H488 388 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms