RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-222	ENST00000406454	FSCN3	Q9NQT6	498 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	KIAA1456	Q9P272	454 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	MRM2	Q9UI43	246 aa	Known RBP	11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	KLK10	O43240	276 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	TAS2R45	P59539	299 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	MITD1	Q8WV92	249 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	PLA1A	Q53H76	456 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	MEST	Q5EB52	335 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	ADAM5	Q6NVV9	412 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	RPUSD3	Q6P087	351 aa	Known RBP	11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	LSMEM1	Q8N8F7	131 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	HGD	Q93099	445 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454		H7BYZ3	331 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	F2R	P25116	425 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	PDCD1	Q15116	288 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	OR2Y1	Q8NGV0	311 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	M1AP	Q8TC57	530 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	CMBL	Q96DG6	245 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	TPPP3	Q9BW30	176 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	COX5A	P20674	150 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	MVD	P53602	400 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	LYRM7	Q5U5X0	104 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	ZNF787	Q6DD87	383 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	C11orf87	Q6NUJ2	197 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	ASB10	Q8WXI3	467 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454		A0A1W2PQF6	199 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	MB	P02144	154 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	CD96	P40200	585 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	PRDX4	Q13162	271 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	KIAA0141	Q14154	515 aa	Predicted RBP	11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	RASL10B	Q96S79	203 aa		11.85	□□□□□ -0.51
CACNA1C-222	ENST00000406454	SPRY3	O43610	288 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	NTN1	O95631	604 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	OR6X1	Q8NH79	312 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	GNB4	Q9HAV0	340 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	ICAM5	Q9UMF0	924 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	GP1BA	P07359	652 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	ERH	P84090	104 aa	Known RBP	11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	ZNF239	Q16600	458 aa	Known RBP	11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	C1QL3	Q5VWW1	255 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	ADAM19	Q9H013	955 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	ZNF768	Q9H5H4	540 aa	Known RBP	11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	UCK1	Q9HA47	277 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	CACFD1	Q9UGQ2	172 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	ADAMTSL1	Q8N6G6	1762 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	TFF2	Q03403	129 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	ETFDH	Q16134	617 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	ZAR1	Q86SH2	424 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	SMRP1	Q8NCR6	262 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	OR5AP2	Q8NGF4	316 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	CT55	Q8WUE5	264 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	NEURL2	Q9BR09	285 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	TRGV10	A0A0A0MS01	117 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	C20orf202	A1L168	122 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	TSEN54	Q7Z6J9	526 aa	Known RBP	11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454		A0A1B0GTQ1	180 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454		A0A1W2PR80	420 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	DCTN6	O00399	190 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	AQP8	O94778	261 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	SLC37A1	P57057	533 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	FLI1	Q01543	452 aa	Predicted RBP	11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	TNFRSF1A	P19438	455 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	PEBP1	P30086	187 aa	Known RBP	11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	GZMM	P51124	257 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	RAG2	P55895	527 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	TAGLN	Q01995	201 aa	Known RBP	11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	CXorf67	Q86X51	503 aa	Predicted RBP	11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	OR4F5	Q8NH21	305 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	PTPMT1	Q8WUK0	201 aa	Predicted RBP	11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	OR4F4	Q96R69	305 aa		11.84	□□□□□ -0.51
CACNA1C-222	ENST00000406454	HRK	O00198	91 aa		11.83	□□□□□ -0.51
CACNA1C-222	ENST00000406454	GPR37	O15354	613 aa		11.83	□□□□□ -0.51
CACNA1C-222	ENST00000406454	TRAF3IP2	O43734	574 aa	Predicted RBP	11.83	□□□□□ -0.51
CACNA1C-222	ENST00000406454	HP	P00738	406 aa		11.83	□□□□□ -0.51
CACNA1C-222	ENST00000406454	SPRED2	Q7Z698	418 aa		11.83	□□□□□ -0.51
CACNA1C-222	ENST00000406454	C20orf196	Q8IYI0	205 aa		11.83	□□□□□ -0.51
CACNA1C-222	ENST00000406454	CLDN23	Q96B33	292 aa		11.83	□□□□□ -0.51
CACNA1C-222	ENST00000406454	AQP7P3	A6NL99	342 aa		11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	ZNF727	A8MUV8	499 aa		11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	OGG1	O15527	345 aa		11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	SLC39A7	Q92504	469 aa		11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	ERGIC1	Q969X5	290 aa		11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	CDC14B	O60729	498 aa		11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	CA6	P23280	308 aa		11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	HES3	Q5TGS1	186 aa		11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	RP1	P56715	2156 aa		11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	LIPT2	A6NK58	231 aa		11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	IGHA1	P01876	353 aa		11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	OR5G3	P0C626	314 aa		11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	ZBTB25	P24278	435 aa		11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	OR3A4P	P47883	348 aa		11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	PINX1	Q96BK5	328 aa	Known RBP	11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	CDX2	Q99626	313 aa	Predicted RBP	11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	GINS3	Q9BRX5	216 aa		11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	KNL1	Q8NG31	2342 aa		11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	OR2M5	A3KFT3	312 aa		11.83	□□□□□ -0.52
CACNA1C-222	ENST00000406454	CLEC18A	A5D8T8	446 aa		11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms