RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 SMIM4Q8WVI0 70 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 SEC22CQ9BRL7 303 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 TAAR3PQ9P1P4 343 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 SLC23A1Q9UHI7 598 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 PINLYPA6NC86 204 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 TUBAL3A6NHL2 446 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 PNPP00491 289 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 PI3P19957 117 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 FUT3P21217 361 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 KIR3DL2P43630 455 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 RFX2P48378 723 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 LINC00114Q6XXX2 140 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 OR10J5Q8NHC4 309 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 FBLIM1Q8WUP2 373 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 CCL17Q92583 94 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 ADAT3Q96EY9 351 aaPredicted RBP7.97□□□□□ -1.13
LIG4-202ENST00000405925 SEC22AQ96IW7 307 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 OR2J1Q9GZK6 312 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 RNF32Q9H0A6 362 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 STARD10Q9Y365 291 aa7.97□□□□□ -1.13
LIG4-202ENST00000405925 SMCO3A2RU48 225 aa7.96□□□□□ -1.13
LIG4-202ENST00000405925 TRIM64CA6NLI5 447 aa7.96□□□□□ -1.13
LIG4-202ENST00000405925 TUSC2O75896 110 aa7.96□□□□□ -1.13
LIG4-202ENST00000405925 HPNP05981 417 aa7.96□□□□□ -1.13
LIG4-202ENST00000405925 TDGF1P13385 188 aa7.96□□□□□ -1.13
LIG4-202ENST00000405925 PTAFRP25105 342 aa7.96□□□□□ -1.13
LIG4-202ENST00000405925 ERP29P30040 261 aaKnown RBP7.96□□□□□ -1.13
LIG4-202ENST00000405925 Q0VFX4 171 aa7.96□□□□□ -1.13
LIG4-202ENST00000405925 BRICD5Q6PL45 260 aa7.96□□□□□ -1.13
LIG4-202ENST00000405925 OR51H1Q8NH63 302 aa7.96□□□□□ -1.13
LIG4-202ENST00000405925 TRMT61AQ96FX7 289 aaKnown RBP7.96□□□□□ -1.13
LIG4-202ENST00000405925 ARHGAP5-AS1Q96IT6 56 aa7.96□□□□□ -1.13
LIG4-202ENST00000405925 TMEM246Q9BRR3 403 aa7.96□□□□□ -1.13
LIG4-202ENST00000405925 MSL2Q9HCI7 577 aa7.96□□□□□ -1.13
LIG4-202ENST00000405925 C12orf4Q9NQ89 552 aa7.96□□□□□ -1.13
LIG4-202ENST00000405925 MGAT4AQ9UM21 535 aa7.96□□□□□ -1.13
LIG4-202ENST00000405925 MPC1Q9Y5U8 109 aa7.96□□□□□ -1.13
LIG4-202ENST00000405925 TMEM272A0A1B0GTI8 110 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 hCG_1809904A0A1W2PP81 198 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 A0A1W2PPE2 198 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 A0A1W2PR64 198 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 A0A1W2PRV1 198 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 NPIPB13A6NJU9 1138 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 OR5B21A6NL26 309 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 NPIPB4C9JG80 1138 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 C3orf80F5H4A9 247 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 RP2O75695 350 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 GLAP06280 429 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 KLK2P20151 261 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 HRH1P35367 487 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 TNFAIP6P98066 277 aaPredicted RBP7.96□□□□□ -1.14
LIG4-202ENST00000405925 FAM58AQ8N1B3 248 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 MAP6Q96JE9 813 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 HYLS1Q96M11 299 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 ZNF2Q9BSG1 426 aaPredicted RBP7.96□□□□□ -1.14
LIG4-202ENST00000405925 C20orf85Q9H1P6 137 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 IGF2RP11717 2491 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 OBSL1O75147 1896 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 BORCS7-ASMTA0A0B4J1R7 106 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 LRRC3CA6NJW4 275 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 H7C2Y5 167 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 MPPED1O15442 326 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 PHF1O43189 567 aaPredicted RBP7.96□□□□□ -1.14
LIG4-202ENST00000405925 TMEM127O75204 238 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 CLPSP04118 112 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 OR5H8P0DN80 308 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 CTSSP25774 331 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 ETV6P41212 452 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 NBL1P41271 181 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 ROM1Q03395 351 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 TCF15Q12870 199 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 KLRB1Q12918 225 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 ASAH1Q13510 395 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 ZNF709Q8N972 641 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 METTL17Q9H7H0 456 aaPredicted RBP7.96□□□□□ -1.14
LIG4-202ENST00000405925 FN3KRPQ9HA64 309 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 GFOD1Q9NXC2 390 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 LSM2Q9Y333 95 aaKnown RBP7.96□□□□□ -1.14
LIG4-202ENST00000405925 NOTCH2Q04721 2471 aa7.96□□□□□ -1.14
LIG4-202ENST00000405925 IGKV1D-43A0A0B4J1Z2 117 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 ZNF724A8MTY0 619 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 SERPINE3A8MV23 424 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 NPIPB7O75200 414 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 RGS11O94810 467 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 TGM6O95932 706 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 ALDOBP05062 364 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 ANXA7P20073 488 aaKnown RBP7.95□□□□□ -1.14
LIG4-202ENST00000405925 LPCAT3Q6P1A2 487 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 FAM185AQ8N0U4 392 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 OR4S1Q8NGB4 309 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 SCGB1C1Q8TD33 95 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 LRRC29Q8WV35 223 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 DCUN1D4Q92564 292 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 NMNAT2Q9BZQ4 307 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 NARFLQ9H6Q4 476 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 CADP27708 2225 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 CDIPTO14735 213 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 ZNF708P17019 499 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 MICBQ29980 383 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 C6orf201Q7Z4U5 140 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms