RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 SELEP16581 610 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 VEGFCP49767 419 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 UNC119Q13432 240 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 RIN1Q13671 783 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 CEACAM21Q3KPI0 293 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 TMEM255AQ5JRV8 349 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 ZBTB37Q5TC79 503 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 STEAP3Q658P3 488 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 HAGHLQ6PII5 290 aaPredicted RBP3.17□□□□□ -1.9
RTN4-208ENST00000404909 CRIP3Q6Q6R5 217 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 SEZ6L2Q6UXD5 910 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 SLC25A26Q70HW3 274 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 BIVMQ86UB2 503 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 CALHM1Q8IU99 346 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 OR51F2Q8NH61 342 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 RNASE6Q93091 150 aaKnown RBP3.17□□□□□ -1.9
RTN4-208ENST00000404909 ITPKCQ96DU7 683 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 NICN1Q9BSH3 213 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 ADAT1Q9BUB4 502 aaKnown RBP3.17□□□□□ -1.9
RTN4-208ENST00000404909 TMEM59Q9BXS4 323 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 SELENOIQ9C0D9 397 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 CST11Q9H112 138 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 ABCG5Q9H222 651 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 NGBQ9NPG2 151 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 TMEM100Q9NV29 134 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 MRPL15Q9P015 296 aaKnown RBP3.17□□□□□ -1.9
RTN4-208ENST00000404909 PURGQ9UJV8 347 aaKnown RBP3.17□□□□□ -1.9
RTN4-208ENST00000404909 A0A1W2PQ09 198 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 CD3GP09693 182 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 CSF3P09919 207 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 IL7P13232 177 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 PPP3CBP16298 524 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 PTAFRP25105 342 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 CFPP27918 469 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 CAPZA1P52907 286 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 SNU13P55769 128 aaKnown RBP3.17□□□□□ -1.9
RTN4-208ENST00000404909 SCAND1P57086 179 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 PITPNAQ00169 270 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 PDZK1IP1Q13113 114 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 OR8G1Q15617 311 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 MSMPQ1L6U9 139 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 MOGAT2Q3SYC2 334 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 C4orf17Q53FE4 359 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 ZNF57Q68EA5 555 aaPredicted RBP3.17□□□□□ -1.9
RTN4-208ENST00000404909 PYHIN1Q6K0P9 492 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 KRT74Q7RTS7 529 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 ZNF611Q8N823 705 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 GDPD1Q8N9F7 314 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 POC5Q8NA72 575 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 C19orf18Q8NEA5 215 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 OR51T1Q8NGJ9 327 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 KCNG3Q8TAE7 436 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 SSC4DQ8WTU2 575 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 OR5P3Q8WZ94 311 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 TECTBQ96PL2 329 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 CCDC32Q9BV29 185 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 FGF23Q9GZV9 251 aaPredicted RBP3.17□□□□□ -1.9
RTN4-208ENST00000404909 METTL9Q9H1A3 318 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 CA10Q9NS85 328 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 RAB22AQ9UL26 194 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 MPC1Q9Y5U8 109 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 ATP23Q9Y6H3 246 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 CACNA1DQ01668 2161 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 PLSCR5A0PG75 271 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 PQLC2LA1A4F0 135 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 MEIS3P1A6NDR6 274 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 IQCF6A8MYZ5 107 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 B8ZZF3 427 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 C3orf80F5H4A9 247 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 F5H5P2 479 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 XRCC3O43542 346 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 CDC14BO60729 498 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 GRPP07492 148 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 CD37P11049 281 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 MGMTP16455 207 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 GABRR1P24046 479 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 GLRXP35754 106 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 MNDAP41218 407 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 KLF3P57682 345 aaPredicted RBP3.17□□□□□ -1.9
RTN4-208ENST00000404909 TAS2R20P59543 309 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 SELENOVP59797 346 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 ZP1P60852 638 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 DGCR2P98153 550 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 PDCD1Q15116 288 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 ZNF181Q2M3W8 571 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 RGS21Q2M5E4 152 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 LYSMD2Q8IV50 215 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 CDH26Q8IXH8 852 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 OR8G5Q8NG78 346 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 OR5A2Q8NGI9 324 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 TMEM171Q8WVE6 324 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 SLAMF9Q96A28 289 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 PLPPR2Q96GM1 343 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 C1orf147Q96MC9 270 aaPredicted RBP3.17□□□□□ -1.9
RTN4-208ENST00000404909 CMTM3Q96MX0 182 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 MICU1Q9BPX6 476 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 SOSTQ9BQB4 213 aa3.17□□□□□ -1.9
RTN4-208ENST00000404909 THAP7Q9BT49 309 aaPredicted RBP3.17□□□□□ -1.9
RTN4-208ENST00000404909 ESRP2Q9H6T0 727 aaKnown RBP3.17□□□□□ -1.9
RTN4-208ENST00000404909 AUNIPQ9H7T9 357 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms