RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 TPD52L3Q96J77 140 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 PRRC1Q96M27 445 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 ARHGDIGQ99819 225 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 CHID1Q9BWS9 393 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 TM2D1Q9BX74 207 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 HCAR1Q9BXC0 346 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 RSPO3Q9BXY4 272 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 ANKRD19PQ9H560 264 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 SH2D2AQ9NP31 389 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 C8orf4Q9NR00 106 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 SDHAF3Q9NRP4 125 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 AGPAT4Q9NRZ5 378 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 C1orf123Q9NWV4 160 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 Q9UF83 564 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 RIMS3Q9UJD0 308 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 AURKCQ9UQB9 309 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 EXOSC1Q9Y3B2 195 aaKnown RBP3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 FAM32AQ9Y421 112 aaKnown RBP3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 MED12LQ86YW9 2145 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 TRBV7-9A0A0J9YWB2 115 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 ARRDC5A6NEK1 342 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 ANKRD30BLA7E2S9 258 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 NPIPA7E9PJI5 369 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 CASKO14936 926 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 CLOCKO15516 846 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 RRP8O43159 456 aaKnown RBP3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZNF264O43296 627 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 SNX4O95219 450 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 OR5F1O95221 314 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 CST1P01037 141 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 CSTAP01040 98 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 NPIPA8P0DM63 369 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 CT45A10P0DMU9 189 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 UQCRBP14927 111 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 PTBP1P26599 531 aaKnown RBP eCLIP3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 ACAA2P42765 397 aaKnown RBP3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 OR1E2P47887 323 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 RFX3P48380 749 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 CYB561P49447 251 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 P2RX1P51575 399 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZNF136P52737 540 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 FBXW4P57775 412 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 SMIM11AP58511 58 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 VLDLRP98155 873 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 SKP2Q13309 424 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 SLC22A10Q63ZE4 541 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 IGFL2Q6UWQ7 119 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 C16orf47Q6ZP98 133 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 RTL4Q6ZR62 310 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 OLIG3Q7RTU3 272 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 PRR22Q8IZ63 422 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 OFCC1Q8IZS5 231 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 SPAG16Q8N0X2 631 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 SVOPLQ8N434 492 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 LINC00471Q8N535 108 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 PACRGLQ8N7B6 248 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 CATSPER1Q8NEC5 780 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 OR10G3Q8NGC4 313 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 OR4D11Q8NGI4 311 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 MRAPQ8TCY5 172 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 DNAJA4Q8WW22 397 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 DTNBP1Q96EV8 351 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 UTP23Q9BRU9 249 aaKnown RBP3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 ANGPTL4Q9BY76 406 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 TBL1XR1Q9BZK7 514 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 ING2Q9H160 280 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 NMNAT1Q9HAN9 279 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 C12orf10Q9HB07 376 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 NTN4Q9HB63 628 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 HPF1Q9NWY4 346 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 STMN3Q9NZ72 180 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 MGAT4BQ9UQ53 548 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 CHCHD2Q9Y6H1 151 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 DMXL2Q8TDJ6 3036 aa3.68□□□□□ -1.82
HMGB3P19-201ENST00000403971 CHD8Q9HCK8 2581 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 COL6A6A6NMZ7 2263 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 PHF3Q92576 2039 aaKnown RBP3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 A0A087WZY1 265 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 A0A0B4J2E0 115 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 IGHV3-35A0A0C4DH35 117 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 A0A1B0GX12 115 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 TRAPPC13A5PLN9 417 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 ARGFXA6NJG6 315 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 LRRC30A6NM36 301 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 CLDN24A6NM45 220 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 H0YJX3 145 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 hCG_2039718K7EN88 272 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 K7ENP7 123 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 GNGT2O14610 69 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 FFAR1O14842 300 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 PPIHO43447 177 aaKnown RBP3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 CHP2O43745 196 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 CDC40O60508 579 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 TPST2O60704 377 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 SCGB2A1O75556 95 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 GADD45GO95257 159 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 IGF2P01344 180 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 P04436 131 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 UBTFL6P0CB48 400 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 PNMTP11086 282 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms