RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 TAAR6Q96RI8 345 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 MTFP1Q9UDX5 166 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 RCL1Q9Y2P8 373 aaKnown RBP16.2■□□□□ 0.18
COL18A1-204ENST00000400337 ATP6V1G2-DDX39BF2Z307 99 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 MVDP53602 400 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 UBE2G1P62253 170 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 ERHP84090 104 aaKnown RBP16.2■□□□□ 0.18
COL18A1-204ENST00000400337 ATG4DQ86TL0 474 aaPredicted RBP16.2■□□□□ 0.18
COL18A1-204ENST00000400337 UBAC2Q8NBM4 344 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 OR2Y1Q8NGV0 311 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 OR4F5Q8NH21 305 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 CT55Q8WUE5 264 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 CORO2AQ92828 525 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 ERGIC1Q969X5 290 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 OR4F4Q96R69 305 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 MRM2Q9UI43 246 aaKnown RBP16.2■□□□□ 0.18
COL18A1-204ENST00000400337 ZNF391Q9UJN7 358 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 PCOLCE2Q9UKZ9 415 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 TMEM30CPA0ZSE6 113 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 FZR1Q9UM11 496 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 DOCK5Q9H7D0 1870 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 OR3A4PP47883 348 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 FAAP24Q9BTP7 215 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 ACTR3CQ9C0K3 210 aaPredicted RBP16.19■□□□□ 0.18
COL18A1-204ENST00000400337 FN3KRPQ9HA64 309 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 LAMP3Q9UQV4 416 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 TRGV10A0A0A0MS01 117 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 NPIPB8E9PQR5 432 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 PRDX4Q13162 271 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 C6orf201Q7Z4U5 140 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 MITD1Q8WV92 249 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 SAT2Q96F10 170 aaPredicted RBP16.19■□□□□ 0.18
COL18A1-204ENST00000400337 CHST6Q9GZX3 395 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 CLEC1BQ9P126 229 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 OR2M5A3KFT3 312 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 OR2C1O95371 312 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 WISP3O95389 354 aaPredicted RBP16.19■□□□□ 0.18
COL18A1-204ENST00000400337 CD37P11049 281 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 FPR2P25090 351 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 PEBP1P30086 187 aaKnown RBP16.19■□□□□ 0.18
COL18A1-204ENST00000400337 CD96P40200 585 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 SLC37A1P57057 533 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 GNB2P62879 340 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 MESTQ5EB52 335 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 OR5AP2Q8NGF4 316 aa16.19■□□□□ 0.18
COL18A1-204ENST00000400337 CLEC18AA5D8T8 446 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 BCL2L11O43521 198 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 ZNF239Q16600 458 aaKnown RBP16.18■□□□□ 0.18
COL18A1-204ENST00000400337 PXDC1Q5TGL8 231 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 SFTPA2Q8IWL1 248 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 CLEC18CQ8NCF0 446 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 ASB13Q8WXK3 278 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 CLDN23Q96B33 292 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 TXN2Q99757 166 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 CNTD2Q9H8S5 307 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 C20orf202A1L168 122 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 H7BYZ3 331 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 TRAF3IP2O43734 574 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-204ENST00000400337 PRSS12P56730 875 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 ARL16Q0P5N6 197 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 Q8IYB0 196 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 OR10V1Q8NGI7 309 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 SLC39A7Q92504 469 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 HGDQ93099 445 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 LYZL6O75951 148 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 ACOT6Q3I5F7 207 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-204ENST00000400337 ZNF787Q6DD87 383 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 JMJD6Q6NYC1 403 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-204ENST00000400337 TCFL5Q9UL49 500 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 POLR2AP24928 1970 aaKnown RBP16.18■□□□□ 0.18
COL18A1-204ENST00000400337 A0A1W2PQD3 144 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 MEX3AA1L020 520 aaKnown RBP16.18■□□□□ 0.18
COL18A1-204ENST00000400337 ZNF727A8MUV8 499 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 DVL1O14640 695 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 BMP5P22003 454 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 DVL1P1P54792 670 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-204ENST00000400337 LRRTM1Q86UE6 522 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 LSMEM1Q8N8F7 131 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 OR6X1Q8NH79 312 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 PTPMT1Q8WUK0 201 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-204ENST00000400337 ASB10Q8WXI3 467 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 GINS3Q9BRX5 216 aa16.18■□□□□ 0.18
COL18A1-204ENST00000400337 A0A1B0GTQ1 180 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 CST7O76096 145 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 C11orf87Q6NUJ2 197 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 ZNF485Q8NCK3 441 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 OIT3Q8WWZ8 545 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 RPUSD4Q96CM3 377 aaKnown RBP16.17■□□□□ 0.18
COL18A1-204ENST00000400337 ZNF831Q5JPB2 1677 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 AQP8O94778 261 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 DMKNQ6E0U4 476 aaPredicted RBP16.17■□□□□ 0.18
COL18A1-204ENST00000400337 TMPRSS13Q9BYE2 586 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 OR7C2O60412 319 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 TNFRSF1AP19438 455 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 COX5AP20674 150 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 DTYMKP23919 212 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 ZBTB25P24278 435 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 LIMK1P53667 647 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 TAS2R45P59539 299 aa16.17■□□□□ 0.18
COL18A1-204ENST00000400337 ST3GAL2Q16842 350 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms