RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 LMAN1LQ9HAT1 526 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 TUBD1Q9UJT1 453 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 ZNF205O95201 554 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 OPN1LWP04000 364 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 PPP1CCP36873 323 aaKnown RBP12.29□□□□□ -0.44
APOB-202ENST00000399256 RAB5CP51148 216 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 RPS23P62266 143 aaKnown RBP12.29□□□□□ -0.44
APOB-202ENST00000399256 SLC35A1P78382 337 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 FZD2Q14332 565 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 RHEBQ15382 184 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 TMEM92Q6UXU6 159 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 FAM57BQ71RH2 274 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 KDF1Q8NAX2 398 aaPredicted RBP12.29□□□□□ -0.44
APOB-202ENST00000399256 MALSU1Q96EH3 234 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 LIN37Q96GY3 246 aaPredicted RBP12.29□□□□□ -0.44
APOB-202ENST00000399256 FBRSQ9HAH7 460 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 ELL3Q9HB65 397 aaPredicted RBP12.29□□□□□ -0.44
APOB-202ENST00000399256 CHST11Q9NPF2 352 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.29□□□□□ -0.44
APOB-202ENST00000399256 RP1P56715 2156 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 LY86O95711 162 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 MBPP02686 304 aaPredicted RBP12.29□□□□□ -0.44
APOB-202ENST00000399256 DCAF7P61962 342 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 NSDHLQ15738 373 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 CARD17Q5XLA6 110 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 COMMD1Q8N668 190 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 OR2AJ1Q8NGZ0 328 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 SHDQ96IW2 340 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 SLC35B3Q9H1N7 401 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 MMP24Q9Y5R2 645 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 DMRT1Q9Y5R6 373 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 SLCO1B1Q9Y6L6 691 aa12.29□□□□□ -0.44
APOB-202ENST00000399256 IGKV3D-11A0A0A0MRZ8 115 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 C5orf63A6NC05 138 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 DHRS7CA6NNS2 312 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 RER1O15258 196 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 THEGLP0DJG4 465 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 GLI4P10075 376 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 CAPZBP47756 277 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 FOXL2P58012 376 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 ZP4Q12836 540 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 MFAP5Q13361 173 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 NSUN5P2Q63ZY6 315 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 PLXDC2Q6UX71 529 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 CUTCQ9NTM9 273 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 SEC16AO15027 2179 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 BORCS7-ASMTA0A0B4J1R7 106 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 SEC11BP0C7V7 166 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 ASCL1P50553 236 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 UCP2P55851 309 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 NDUFA6P56556 154 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 PYY3Q5JQD4 70 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 C6orf201Q7Z4U5 140 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 FAM213BQ8TBF2 198 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 RARRES2Q99969 163 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 PLEKHA2Q9HB19 425 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 COPS7AQ9UBW8 275 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 CD207Q9UJ71 328 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 MCTS1Q9ULC4 181 aaKnown RBP12.28□□□□□ -0.44
APOB-202ENST00000399256 MMACHCQ9Y4U1 282 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 TCRBV21S2A2A0A5A6 115 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 IFITM10A6NMD0 228 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 ZNF729A6NN14 1252 aaPredicted RBP12.28□□□□□ -0.44
APOB-202ENST00000399256 STMND1H3BQB6 276 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 SEMA4FO95754 770 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 KLK3P07288 261 aaPredicted RBP12.28□□□□□ -0.44
APOB-202ENST00000399256 SURF2Q15527 256 aaPredicted RBP12.28□□□□□ -0.44
APOB-202ENST00000399256 CDCP2Q5VXM1 449 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 TMEM182Q6ZP80 229 aaPredicted RBP12.28□□□□□ -0.44
APOB-202ENST00000399256 MFSD8Q8NHS3 518 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 TOMM40LQ969M1 308 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 ARV1Q9H2C2 271 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 RCL1Q9Y2P8 373 aaKnown RBP12.28□□□□□ -0.44
APOB-202ENST00000399256 HDGFL3Q9Y3E1 203 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 HS3ST3A1Q9Y663 406 aa12.28□□□□□ -0.44
APOB-202ENST00000399256 SPEGQ15772 3267 aa12.27□□□□□ -0.44
APOB-202ENST00000399256 SPTY2D1-AS1A0A0U1RR47 76 aa12.27□□□□□ -0.44
APOB-202ENST00000399256 ZNF727A8MUV8 499 aa12.27□□□□□ -0.44
APOB-202ENST00000399256 E9PLN8 166 aa12.27□□□□□ -0.44
APOB-202ENST00000399256 ZNF84P51523 738 aa12.27□□□□□ -0.44
APOB-202ENST00000399256 CEBPGP53567 150 aa12.27□□□□□ -0.44
APOB-202ENST00000399256 CLRN1P58418 232 aa12.27□□□□□ -0.44
APOB-202ENST00000399256 KISS1Q15726 138 aa12.27□□□□□ -0.44
APOB-202ENST00000399256 HEPN1Q6WQI6 88 aa12.27□□□□□ -0.44
APOB-202ENST00000399256 ZNF283Q8N7M2 679 aa12.27□□□□□ -0.44
APOB-202ENST00000399256 THAP3Q8WTV1 239 aaPredicted RBP12.27□□□□□ -0.44
APOB-202ENST00000399256 TMEM234Q8WY98 164 aa12.27□□□□□ -0.44
APOB-202ENST00000399256 REEP6Q96HR9 211 aa12.27□□□□□ -0.44
APOB-202ENST00000399256 JSRP1Q96MG2 331 aaPredicted RBP12.27□□□□□ -0.44
APOB-202ENST00000399256 RFNGQ9Y644 331 aa12.27□□□□□ -0.44
APOB-202ENST00000399256 CRYM-AS1A6NIL9 109 aa12.27□□□□□ -0.45
APOB-202ENST00000399256 E5RGE8 158 aa12.27□□□□□ -0.45
APOB-202ENST00000399256 RAMP1O60894 148 aa12.27□□□□□ -0.45
APOB-202ENST00000399256 GABRR1P24046 479 aa12.27□□□□□ -0.45
APOB-202ENST00000399256 CHATP28329 748 aa12.27□□□□□ -0.45
APOB-202ENST00000399256 P2RY1P47900 373 aa12.27□□□□□ -0.45
APOB-202ENST00000399256 CLINT1Q14677 625 aa12.27□□□□□ -0.45
APOB-202ENST00000399256 TSPO2Q5TGU0 170 aa12.27□□□□□ -0.45
APOB-202ENST00000399256 FAM89BQ8N5H3 189 aa12.27□□□□□ -0.45
APOB-202ENST00000399256 ZNF383Q8NA42 475 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms