RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 RAB40AQ8WXH6 277 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 MRI1Q9BV20 369 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 CLCF1Q9UBD9 225 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 MLXQ9UH92 298 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 KCNK7Q9Y2U2 307 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 H7C2Y5 167 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 LDLRAD4O15165 306 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 RNF224P0DH78 156 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 ACKR3P25106 362 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 P4HA3Q7Z4N8 544 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 ADGRE4PQ86SQ3 457 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 RBMXL3Q8N7X1 1067 aaKnown RBP13.16□□□□□ -0.3
COL25A1-201ENST00000399126 FAM46BQ96A09 425 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 RBFOX1Q9NWB1 397 aaKnown RBP13.16□□□□□ -0.3
COL25A1-201ENST00000399126 NCOR2Q9Y618 2525 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 A0A0U1RQV5 110 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 MEGF11A6BM72 1044 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 SMLR1H3BR10 107 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 IL18BPO95998 194 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 PLATP00750 562 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 S100PP25815 95 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 BTCP35070 178 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 PITPNAQ00169 270 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 KRTAP27-1Q3LI81 207 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 HIKESHIQ53FT3 197 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 C1orf100Q5SVJ3 147 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 ANKRD16Q6P6B7 361 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 DRAM2Q6UX65 266 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 IGFL3Q6UXB1 125 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 TAS2R3Q9NYW6 316 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 PIGLQ9Y2B2 252 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 LOC100509620A0A075B734 347 aa13.15□□□□□ -0.3
COL25A1-201ENST00000399126 TMEM82A0PJX8 343 aa13.15□□□□□ -0.3
COL25A1-201ENST00000399126 J3QW42 95 aa13.15□□□□□ -0.3
COL25A1-201ENST00000399126 ORC5O43913 435 aa13.15□□□□□ -0.3
COL25A1-201ENST00000399126 DHRS3O75911 302 aa13.15□□□□□ -0.3
COL25A1-201ENST00000399126 GDNFP39905 211 aa13.15□□□□□ -0.3
COL25A1-201ENST00000399126 MOGAT2Q3SYC2 334 aa13.15□□□□□ -0.3
COL25A1-201ENST00000399126 SPACA3Q8IXA5 215 aa13.15□□□□□ -0.3
COL25A1-201ENST00000399126 NINJ1Q92982 152 aa13.15□□□□□ -0.3
COL25A1-201ENST00000399126 CYYR1Q96J86 154 aa13.15□□□□□ -0.3
COL25A1-201ENST00000399126 ATG5Q9H1Y0 275 aa13.15□□□□□ -0.3
COL25A1-201ENST00000399126 CLEC4MQ9H2X3 399 aaPredicted RBP13.15□□□□□ -0.3
COL25A1-201ENST00000399126 AQP7O14520 342 aa13.15□□□□□ -0.31
COL25A1-201ENST00000399126 CD79AP11912 226 aa13.15□□□□□ -0.31
COL25A1-201ENST00000399126 CCNOP22674 350 aa13.15□□□□□ -0.31
COL25A1-201ENST00000399126 PTAFRP25105 342 aa13.15□□□□□ -0.31
COL25A1-201ENST00000399126 ZNF93P35789 620 aaPredicted RBP13.15□□□□□ -0.31
COL25A1-201ENST00000399126 PCBD1P61457 104 aa13.15□□□□□ -0.31
COL25A1-201ENST00000399126 GUCA2AQ02747 115 aa13.15□□□□□ -0.31
COL25A1-201ENST00000399126 UNC119Q13432 240 aa13.15□□□□□ -0.31
COL25A1-201ENST00000399126 EXOSC2Q13868 293 aaKnown RBP13.15□□□□□ -0.31
COL25A1-201ENST00000399126 UBE2V2Q15819 145 aa13.15□□□□□ -0.31
COL25A1-201ENST00000399126 RTN4RL2Q86UN3 420 aa13.15□□□□□ -0.31
COL25A1-201ENST00000399126 OR5D18Q8NGL1 313 aa13.15□□□□□ -0.31
COL25A1-201ENST00000399126 GTF3AQ92664 365 aaKnown RBP13.15□□□□□ -0.31
COL25A1-201ENST00000399126 UPRTQ96BW1 309 aa13.15□□□□□ -0.31
COL25A1-201ENST00000399126 REEP6Q96HR9 211 aa13.15□□□□□ -0.31
COL25A1-201ENST00000399126 PAPOLGQ9BWT3 736 aaKnown RBP13.15□□□□□ -0.31
COL25A1-201ENST00000399126 PARD6GQ9BYG4 376 aaPredicted RBP13.15□□□□□ -0.31
COL25A1-201ENST00000399126 OR10A2Q9H208 303 aa13.15□□□□□ -0.31
COL25A1-201ENST00000399126 NDRG3Q9UGV2 375 aa13.15□□□□□ -0.31
COL25A1-201ENST00000399126 V9GYS6 101 aa13.15□□□□□ -0.31
COL25A1-201ENST00000399126 PIEZO1Q92508 2521 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 FAM240BA0A1B0GVZ2 78 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 GGT3PA6NGU5 568 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 DNASE2O00115 360 aaPredicted RBP13.14□□□□□ -0.31
COL25A1-201ENST00000399126 OR3A4PP47883 348 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 ECH1Q13011 328 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 CRIP3Q6Q6R5 217 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 BAIAP2L2Q6UXY1 529 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 Q6ZS92 163 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 FGD2Q7Z6J4 655 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 TOMM5Q8N4H5 51 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 PAQR4Q8N4S7 273 aaPredicted RBP13.14□□□□□ -0.31
COL25A1-201ENST00000399126 SORCS2Q96PQ0 1159 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 OR51M1Q9H341 326 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 METTL17Q9H7H0 456 aaPredicted RBP13.14□□□□□ -0.31
COL25A1-201ENST00000399126 HEXA-AS1Q9H8Q6 139 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 ZMAT3Q9HA38 289 aaKnown RBP13.14□□□□□ -0.31
COL25A1-201ENST00000399126 TRAV18A0A075B6X5 111 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 MEIS3P1A6NDR6 274 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 MFSD2BA6NFX1 497 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 CTDSPLO15194 276 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 XRCC3O43542 346 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 GSTZ1O43708 216 aaPredicted RBP13.14□□□□□ -0.31
COL25A1-201ENST00000399126 HCKP08631 526 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 SCAND1P57086 179 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 PLEKHN1Q494U1 663 aaPredicted RBP13.14□□□□□ -0.31
COL25A1-201ENST00000399126 TMEM255AQ5JRV8 349 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 C9orf106Q8NAJ2 232 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 ZNF431Q8TF32 576 aaPredicted RBP13.14□□□□□ -0.31
COL25A1-201ENST00000399126 SDHAF2Q9NX18 166 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 KIF25Q9UIL4 384 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 LHX6Q9UPM6 363 aa13.14□□□□□ -0.31
COL25A1-201ENST00000399126 A0A1W2PP11 408 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 MT-ND4P03905 459 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 ZNF92Q03936 586 aa13.13□□□□□ -0.31
COL25A1-201ENST00000399126 KLF9Q13886 244 aaPredicted RBP13.13□□□□□ -0.31
COL25A1-201ENST00000399126 TATDN3Q17R31 274 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms