RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 KIR2DL1P43626 348 aaPredicted RBP10.12□□□□□ -0.79
TTC28-201ENST00000397906 ALG14Q96F25 216 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 PHYHD1Q5SRE7 291 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 ABHD3Q8WU67 409 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 DOK5Q9P104 306 aa10.12□□□□□ -0.79
TTC28-201ENST00000397906 TCRBV5S2A0A599 114 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 IL5P05113 134 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 ABI3BPQ7Z7G0 1075 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 SLC25A19Q9HC21 320 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 AMMECR1Q9Y4X0 333 aaPredicted RBP10.11□□□□□ -0.79
TTC28-201ENST00000397906 NKX2-2O95096 273 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 COX6B1P14854 86 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 DCAF10Q5QP82 559 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 SLC38A6Q8IZM9 456 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 GOLT1BQ9Y3E0 138 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 EPPINO95925 133 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 TMPRSS3P57727 454 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 C6orf201Q7Z4U5 140 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 GABARAPL1Q9H0R8 117 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 IGHV3OR15-7A0A075B7D8 119 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 GAMTQ14353 236 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 VN1R4Q7Z5H5 301 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 MRGPREQ86SM8 312 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 Q8IYB0 196 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 ARHGDIGQ99819 225 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 C20orf202A1L168 122 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 HRKO00198 91 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 CYTIPO60759 359 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 DHRS3O75911 302 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 HOXC4P09017 264 aaPredicted RBP10.11□□□□□ -0.79
TTC28-201ENST00000397906 SP6Q3SY56 376 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 RTN4IP1Q8WWV3 396 aaPredicted RBP10.11□□□□□ -0.79
TTC28-201ENST00000397906 PP6455Q8WZ26 134 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 SLC25A4P12235 298 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 KISS1Q15726 138 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 TNXAQ16473 311 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 KCNE1BA0A087WTH5 132 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 PDZD11Q5EBL8 140 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 HSD17B10Q99714 261 aaKnown RBP10.11□□□□□ -0.79
TTC28-201ENST00000397906 OR5V1Q9UGF6 321 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 TSTD3H0UI37 97 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 CALCRP30988 508 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 DCTDP32321 178 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 H3F3AP84243 136 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 CLEC12BQ2HXU8 276 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 LYSMD2Q8IV50 215 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 SYS1Q8N2H4 156 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 ADGRL4Q9HBW9 690 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 PLPP3O14495 311 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 TCAPO15273 167 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 RHOBP62745 196 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 MOGAT3Q86VF5 341 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 CXXC4Q9H2H0 198 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 TMEM231Q9H6L2 316 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 AAMDCQ9H7C9 122 aa10.11□□□□□ -0.79
TTC28-201ENST00000397906 TOX3O15405 576 aaPredicted RBP10.1□□□□□ -0.79
TTC28-201ENST00000397906 OR5D13Q8NGL4 314 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 FGF11Q92914 225 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 ZNF768Q9H5H4 540 aaKnown RBP10.1□□□□□ -0.79
TTC28-201ENST00000397906 KLK11Q9UBX7 282 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 AMDHD2Q9Y303 409 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 FCER1GP30273 86 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 CDH26Q8IXH8 852 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 MOGAT1Q96PD6 335 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 ACTR3CQ9C0K3 210 aaPredicted RBP10.1□□□□□ -0.79
TTC28-201ENST00000397906 LAMB2P55268 1798 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 SKA3Q8IX90 412 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 BOLA1Q9Y3E2 137 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 ZNF354AO60765 605 aaPredicted RBP10.1□□□□□ -0.79
TTC28-201ENST00000397906 GP2P55259 537 aaKnown RBP10.1□□□□□ -0.79
TTC28-201ENST00000397906 ZNF441Q8N8Z8 693 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 OR4Q3Q8NH05 313 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 TERB2Q8NHR7 220 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 IL36GQ9NZH8 169 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 LAMP3Q9UQV4 416 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 IGLV3-16A0A075B6K0 115 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 TFAP2AP05549 437 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 BHLHA9Q7RTU4 235 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 OR2M7Q8NG81 312 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 CIB3Q96Q77 187 aaPredicted RBP10.1□□□□□ -0.79
TTC28-201ENST00000397906 SLC25A22Q9H936 323 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 LRRC3CA6NJW4 275 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 SELENOPP49908 381 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 ARHGAP5-AS1Q96IT6 56 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 ADGRG7Q96K78 797 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 SLC35D1Q9NTN3 355 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 J3KRW8 73 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 RPL12P30050 165 aaKnown RBP10.1□□□□□ -0.79
TTC28-201ENST00000397906 FOXO1Q12778 655 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 CHODLQ9H9P2 273 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 FUT3P21217 361 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 CEACAM3P40198 252 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 INSL4Q14641 139 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 HLXQ14774 488 aaPredicted RBP10.1□□□□□ -0.79
TTC28-201ENST00000397906 CYR61O00622 381 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 TMEM56Q96MV1 263 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 hADV38S2A0JD32 116 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 OR2M5A3KFT3 312 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 OR6C68A6NDL8 312 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms