RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 FAM76BQ5HYJ3 339 aa16.63■□□□□ 0.25
PDLIM2-205ENST00000397761 CDH24Q86UP0 819 aa16.63■□□□□ 0.25
PDLIM2-205ENST00000397761 ZSCAN4Q8NAM6 433 aaPredicted RBP16.63■□□□□ 0.25
PDLIM2-205ENST00000397761 OR5D18Q8NGL1 313 aa16.63■□□□□ 0.25
PDLIM2-205ENST00000397761 KCNG3Q8TAE7 436 aa16.63■□□□□ 0.25
PDLIM2-205ENST00000397761 SLC22A4Q9H015 551 aa16.63■□□□□ 0.25
PDLIM2-205ENST00000397761 ESRP2Q9H6T0 727 aaKnown RBP16.63■□□□□ 0.25
PDLIM2-205ENST00000397761 ZNF442Q9H7R0 627 aa16.63■□□□□ 0.25
PDLIM2-205ENST00000397761 NPDC1Q9NQX5 325 aaPredicted RBP16.63■□□□□ 0.25
PDLIM2-205ENST00000397761 IL36GQ9NZH8 169 aa16.63■□□□□ 0.25
PDLIM2-205ENST00000397761 DOPEY1Q5JWR5 2465 aa16.63■□□□□ 0.25
PDLIM2-205ENST00000397761 A0A0A6YYH2 397 aa16.62■□□□□ 0.25
PDLIM2-205ENST00000397761 A0A0G2JMP0 313 aa16.62■□□□□ 0.25
PDLIM2-205ENST00000397761 A0A0X1KG70 313 aa16.62■□□□□ 0.25
PDLIM2-205ENST00000397761 A6NJ64 397 aa16.62■□□□□ 0.25
PDLIM2-205ENST00000397761 PDZK1IP1Q13113 114 aa16.62■□□□□ 0.25
PDLIM2-205ENST00000397761 OR10K2Q6IF99 312 aa16.62■□□□□ 0.25
PDLIM2-205ENST00000397761 CALHM1Q8IU99 346 aa16.62■□□□□ 0.25
PDLIM2-205ENST00000397761 OR4M2Q8NGB6 313 aa16.62■□□□□ 0.25
PDLIM2-205ENST00000397761 LINC01560Q8TB33 94 aa16.62■□□□□ 0.25
PDLIM2-205ENST00000397761 RNF170Q96K19 258 aa16.62■□□□□ 0.25
PDLIM2-205ENST00000397761 HIST1H2AAQ96QV6 131 aa16.62■□□□□ 0.25
PDLIM2-205ENST00000397761 USP9XQ93008 2570 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-205ENST00000397761 UBR5O95071 2799 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-205ENST00000397761 ZNF732B4DXR9 585 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 MLNRO43193 412 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 XRCC3O43542 346 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 CDK2P24941 298 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 GPM6AP51674 278 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 GNG3P63215 75 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 IFITM3Q01628 133 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 IL18Q14116 193 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 PYHIN1Q6K0P9 492 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 Q6ZR03 302 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 SAXO1Q8IYX7 474 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 TMEM104Q8NE00 496 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 DVL3Q92997 716 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 RADILQ96JH8 1075 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 ABHD1Q96SE0 405 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 TMEM100Q9NV29 134 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 TUBAL3A6NHL2 446 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 TIMM8AO60220 97 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 CDC14BO60729 498 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 UPK1BO75841 260 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 TMEM225BP0DP42 221 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 MPZP25189 248 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 PTH2RP49190 550 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 KLF3P57682 345 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 TMEM200AQ86VY9 491 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 LRP11Q86VZ4 500 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 DMRTC2Q8IXT2 367 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 PIAS4Q8N2W9 510 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 Q8NFD4 153 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 MRPL24Q96A35 216 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 NUDT16L1Q9BRJ7 211 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 ADAT1Q9BUB4 502 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 RTL8AQ9BWD3 113 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 CST11Q9H112 138 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 OR51I2Q9H344 312 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 CA10Q9NS85 328 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 FZR1Q9UM11 496 aa16.61■□□□□ 0.25
PDLIM2-205ENST00000397761 ABCA4P78363 2273 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 IGKV1-12A0A0C4DH73 117 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 SHISA9B4DS77 424 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 CTDSPLO15194 276 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 ZNF780AO75290 641 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 IGKV1D-12P01611 117 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 HLA-DQB1P01920 261 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 SNTB1Q13884 538 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 GPR176Q14439 515 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 FAM189A2Q15884 450 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 ZNF181Q2M3W8 571 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 SLC22A6Q4U2R8 563 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 BEX5Q5H9J7 111 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 C16orf87Q6PH81 154 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 SLC22A25Q6T423 547 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 WDR86Q86TI4 376 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 ZNF573Q86YE8 665 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 ZNF611Q8N823 705 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 OR13G1Q8NGZ3 307 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 PLPPR2Q96GM1 343 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 S100A13Q99584 98 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 MICU1Q9BPX6 476 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 PKIBQ9C010 78 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 LPAR5Q9H1C0 372 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 DIABLOQ9NR28 239 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 MYEF2Q9P2K5 600 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 ING4Q9UNL4 249 aa16.6■□□□□ 0.25
PDLIM2-205ENST00000397761 ARFGEF3Q5TH69 2177 aa16.59■□□□□ 0.25
PDLIM2-205ENST00000397761 METTL21EPA6NDL7 271 aa16.59■□□□□ 0.25
PDLIM2-205ENST00000397761 TMEM210A6NLX4 147 aa16.59■□□□□ 0.25
PDLIM2-205ENST00000397761 RAB27BO00194 218 aa16.59■□□□□ 0.25
PDLIM2-205ENST00000397761 SPRY1O43609 319 aaPredicted RBP16.59■□□□□ 0.25
PDLIM2-205ENST00000397761 KDM4BO94953 1096 aa16.59■□□□□ 0.25
PDLIM2-205ENST00000397761 HAAOP46952 286 aa16.59■□□□□ 0.25
PDLIM2-205ENST00000397761 PITPNAQ00169 270 aa16.59■□□□□ 0.25
PDLIM2-205ENST00000397761 OR8G1Q15617 311 aa16.59■□□□□ 0.25
PDLIM2-205ENST00000397761 PYDC2Q56P42 97 aa16.59■□□□□ 0.25
PDLIM2-205ENST00000397761 TMEM69Q5SWH9 247 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms