RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 ZNF79Q15937 498 aa11.62□□□□□ -0.55
MCF2L-209ENST00000397036 ALKBH2Q6NS38 261 aa11.62□□□□□ -0.55
MCF2L-209ENST00000397036 FAM131AQ6UXB0 335 aa11.62□□□□□ -0.55
MCF2L-209ENST00000397036 NPRL2Q8WTW4 380 aa11.62□□□□□ -0.55
MCF2L-209ENST00000397036 TNFAIP8L1Q8WVP5 186 aa11.62□□□□□ -0.55
MCF2L-209ENST00000397036 ZC3HAV1LQ96H79 300 aaKnown RBP11.62□□□□□ -0.55
MCF2L-209ENST00000397036 RNF170Q96K19 258 aa11.62□□□□□ -0.55
MCF2L-209ENST00000397036 CST11Q9H112 138 aa11.62□□□□□ -0.55
MCF2L-209ENST00000397036 RHOFQ9HBH0 211 aa11.62□□□□□ -0.55
MCF2L-209ENST00000397036 DIABLOQ9NR28 239 aa11.62□□□□□ -0.55
MCF2L-209ENST00000397036 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-209ENST00000397036 TMEM210A6NLX4 147 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 ZNF732B4DXR9 585 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 PRSS44E7EML9 344 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 J3QRK9 145 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 TIMM8AO60220 97 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-209ENST00000397036 CTAG2O75638 210 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 ACAA1P09110 424 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-209ENST00000397036 MPZP25189 248 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 KLF3P57682 345 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-209ENST00000397036 UNC119Q13432 240 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 MSMPQ1L6U9 139 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 ALKBH6Q3KRA9 238 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 TMEM255AQ5JRV8 349 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 C1QL2Q7Z5L3 287 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 FAM89BQ8N5H3 189 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 BHLHE23Q8NDY6 225 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 MRPL24Q96A35 216 aaKnown RBP11.61□□□□□ -0.55
MCF2L-209ENST00000397036 S100A13Q99584 98 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 SDHCQ99643 169 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-209ENST00000397036 RTL8AQ9BWD3 113 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 PKIBQ9C010 78 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 FGF23Q9GZV9 251 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-209ENST00000397036 METTL9Q9H1A3 318 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 OR51I2Q9H344 312 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 CA10Q9NS85 328 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 ZNF462Q96JM2 2506 aa11.61□□□□□ -0.55
MCF2L-209ENST00000397036 WIPF3A6NGB9 483 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 AKR7A2O43488 359 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 PTBP3O95758 552 aaKnown RBP11.6□□□□□ -0.55
MCF2L-209ENST00000397036 TMEM225BP0DP42 221 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 GRNP28799 593 aaKnown RBP11.6□□□□□ -0.55
MCF2L-209ENST00000397036 EFNB2P52799 333 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 MRPS10P82664 201 aaKnown RBP11.6□□□□□ -0.55
MCF2L-209ENST00000397036 ZNF181Q2M3W8 571 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 ELP2Q6IA86 826 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 SLC22A25Q6T423 547 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 MKXQ8IYA7 352 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 LINC01560Q8TB33 94 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 URM1Q9BTM9 101 aaKnown RBP11.6□□□□□ -0.55
MCF2L-209ENST00000397036 TM2D1Q9BX74 207 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 NPDC1Q9NQX5 325 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-209ENST00000397036 ROS1P08922 2347 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-209ENST00000397036 ISPDA4D126 451 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 LRP5LA4QPB2 252 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 SHISA9B4DS77 424 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 CDC14BO60729 498 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 UPK1BO75841 260 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 HLA-DQB1P01920 261 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 PRB1P04280 392 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 CD3EP07766 207 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 CDK2P24941 298 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 PTH2RP49190 550 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 GPM6AP51674 278 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 IL24Q13007 206 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 PLA2G7Q13093 441 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 IL18Q14116 193 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 OR8G1Q15617 311 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 DMRTC1Q5HYR2 192 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 Q6ZR03 302 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 DNM1P46Q6ZS02 220 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 CELF2-AS1Q8N7Q2 184 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 OR8S1Q8NH09 359 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 FAM46BQ96A09 425 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 PHF21AQ96BD5 680 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 PLPPR2Q96GM1 343 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 ABHD1Q96SE0 405 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 NKX3-1Q99801 234 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-209ENST00000397036 TMEM204Q9BSN7 226 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 LPAR5Q9H1C0 372 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 TLNRD1Q9H1K6 362 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 CXXC4Q9H2H0 198 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 C14orf119Q9NWQ9 140 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 NKIRAS2Q9NYR9 191 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 ING4Q9UNL4 249 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 FAM208BQ5VWN6 2430 aa11.6□□□□□ -0.55
MCF2L-209ENST00000397036 SMG1Q96Q15 3661 aaKnown RBP11.59□□□□□ -0.55
MCF2L-209ENST00000397036 A0A0G2JMP0 313 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 A0A0X1KG70 313 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 RAB27BO00194 218 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 GSTZ1O43708 216 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-209ENST00000397036 KDM4BO94953 1096 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 ADH4P08319 380 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 IGFBP2P18065 325 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 LOXP28300 417 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-209ENST00000397036 HAAOP46952 286 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 RPS27AP62979 156 aaKnown RBP11.59□□□□□ -0.55
MCF2L-209ENST00000397036 TMEM69Q5SWH9 247 aa11.59□□□□□ -0.55
MCF2L-209ENST00000397036 HACD4Q5VWC8 232 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms