RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 UXS1Q8NBZ7 420 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 FDCSPQ8NFU4 85 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 RADILQ96JH8 1075 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 Q96M66 194 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 GP6Q9HCN6 339 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 SLC7A11Q9UPY5 501 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 ZNF407Q9C0G0 2248 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 IGKV1-27A0A075B6S5 117 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 LOC100509620A0A075B734 347 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 CA11O75493 328 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 CSTBP04080 98 aaKnown RBP12.97□□□□□ -0.33
CBX3-202ENST00000396386 CD79AP11912 226 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 AMY2BP19961 511 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 ZNF81P51508 661 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 PPA1Q15181 289 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 MICBQ29980 383 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 C11orf88Q6PI97 169 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 ST8SIA4Q92187 359 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 MRGPRFQ96AM1 343 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 OPN4Q9UHM6 478 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 PRSS50Q9UI38 385 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 EP300Q09472 2414 aaPredicted RBP12.97□□□□□ -0.33
CBX3-202ENST00000396386 MYO7BQ6PIF6 2116 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 SPRY1O43609 319 aaPredicted RBP12.96□□□□□ -0.33
CBX3-202ENST00000396386 HTR3BO95264 441 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 PLATP00750 562 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 WT1P19544 449 aaPredicted RBP12.96□□□□□ -0.33
CBX3-202ENST00000396386 S100A1P23297 94 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 FUT6P51993 359 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 ATP1B3P54709 279 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 H2BFSP57053 126 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 DHRS2Q13268 280 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 CAMK2BQ13554 666 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 C2orf68Q2NKX9 166 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 C17orf107Q6ZR85 190 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 MOB3CQ70IA8 216 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 DPPA2Q7Z7J5 298 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 SLC25A42Q86VD7 318 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 HOGA1Q86XE5 327 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 ARRDC1Q8N5I2 433 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 OR5H2Q8NGV7 314 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 FBXW5Q969U6 566 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 C12orf49Q9H741 205 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 SLC23A1Q9UHI7 598 aa12.96□□□□□ -0.33
CBX3-202ENST00000396386 C5orf49A4QMS7 147 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 ZNF503-AS2A6NEH8 195 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 OR2AT4A6NND4 320 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 ANGPTL7O43827 346 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 SLC22A5O76082 557 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 SIX6O95475 246 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 HLA-AP01891 365 aaKnown RBP12.95□□□□□ -0.34
CBX3-202ENST00000396386 GABRR1P24046 479 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 TAS2R46P59540 309 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 LGALSLQ3ZCW2 172 aaPredicted RBP12.95□□□□□ -0.34
CBX3-202ENST00000396386 IGFL2Q6UWQ7 119 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 ASCL4Q6XD76 172 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 ASCL5Q7RTU5 278 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 P4HA3Q7Z4N8 544 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 APOBEC3DQ96AK3 386 aaPredicted RBP12.95□□□□□ -0.34
CBX3-202ENST00000396386 TMPRSS13Q9BYE2 586 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 RGS11O94810 467 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 IGHG3P01860 377 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 C4BPBP20851 252 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 CCNOP22674 350 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 CD34P28906 385 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 MPGP29372 298 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 PER3P56645 1201 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 TAS2R31P59538 309 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 PLP2Q04941 152 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 MALLQ13021 153 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 FREM1Q5H8C1 2179 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 FAHD2BQ6P2I3 314 aaPredicted RBP12.95□□□□□ -0.34
CBX3-202ENST00000396386 MRPL21Q7Z2W9 205 aaKnown RBP12.95□□□□□ -0.34
CBX3-202ENST00000396386 LYG2Q86SG7 212 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 OR8H1Q8NGG4 311 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 OR1K1Q8NGR3 316 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 NANOS1Q8WY41 292 aaKnown RBP12.95□□□□□ -0.34
CBX3-202ENST00000396386 PIGCQ92535 297 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 FAHD2AQ96GK7 314 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 CYYR1Q96J86 154 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 IL36GQ9NZH8 169 aa12.95□□□□□ -0.34
CBX3-202ENST00000396386 NOP16Q9Y3C1 178 aaKnown RBP12.95□□□□□ -0.34
CBX3-202ENST00000396386 DNAJC13O75165 2243 aa12.94□□□□□ -0.34
CBX3-202ENST00000396386 TRAV17A0A0B4J275 112 aa12.94□□□□□ -0.34
CBX3-202ENST00000396386 SNAPC5O75971 98 aa12.94□□□□□ -0.34
CBX3-202ENST00000396386 HTR2BP41595 481 aa12.94□□□□□ -0.34
CBX3-202ENST00000396386 OR3A2P47893 321 aa12.94□□□□□ -0.34
CBX3-202ENST00000396386 RAB1AP62820 205 aa12.94□□□□□ -0.34
CBX3-202ENST00000396386 NKAPLQ5M9Q1 402 aa12.94□□□□□ -0.34
CBX3-202ENST00000396386 DCAF12L2Q5VW00 463 aa12.94□□□□□ -0.34
CBX3-202ENST00000396386 FBXW9Q5XUX1 488 aa12.94□□□□□ -0.34
CBX3-202ENST00000396386 CSNK2A3Q8NEV1 391 aa12.94□□□□□ -0.34
CBX3-202ENST00000396386 PXT1Q8NFP0 134 aa12.94□□□□□ -0.34
CBX3-202ENST00000396386 OR56B2PQ8NGI1 322 aa12.94□□□□□ -0.34
CBX3-202ENST00000396386 ZNF891A8MT65 544 aaPredicted RBP12.93□□□□□ -0.34
CBX3-202ENST00000396386 SS18L1O75177 396 aaPredicted RBP12.93□□□□□ -0.34
CBX3-202ENST00000396386 IL2RAP01589 272 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 SERPINA5P05154 406 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 ZBTB25P24278 435 aa12.93□□□□□ -0.34
CBX3-202ENST00000396386 SNU13P55769 128 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms