RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 NMNAT1Q9HAN9 279 aaPredicted RBP10.84□□□□□ -0.67
VCPKMT-201ENST00000395859 ABCB10Q9NRK6 738 aa10.84□□□□□ -0.67
VCPKMT-201ENST00000395859 VNN3Q9NY84 501 aa10.84□□□□□ -0.67
VCPKMT-201ENST00000395859 ZNF222Q9UK12 451 aa10.84□□□□□ -0.67
VCPKMT-201ENST00000395859 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 DCTN6O00399 190 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 CDIPTO14735 213 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 DENRO43583 198 aaKnown RBP10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 SEMG1P04279 462 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 IFI30P13284 250 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 NCK1P16333 377 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 COX7A1P24310 79 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 OTX1P32242 354 aaPredicted RBP10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 NAA10P41227 235 aaPredicted RBP10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 ECI1P42126 302 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 DLX6P56179 175 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 ST3GAL3Q11203 375 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 SSX2Q16385 188 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 GLYATL3Q5SZD4 288 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 ZNF626Q68DY1 528 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 IZUMO2Q6UXV1 221 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 ZBTB49Q6ZSB9 765 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 DPY19L4Q7Z388 723 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 ZDHHC13Q8IUH4 622 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 OSR2Q8N2R0 312 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 OR10Z1Q8NGY1 313 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 ISOC1Q96CN7 298 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 TM2D3Q9BRN9 247 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 NUAK2Q9H093 628 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 GRHPRQ9UBQ7 328 aa10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 ZNF256Q9Y2P7 627 aaPredicted RBP10.83□□□□□ -0.68
VCPKMT-201ENST00000395859 IGKV1D-17A0A075B6S4 117 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 GGT3PA6NGU5 568 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 XKRYO14609 159 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 TIPRLO75663 272 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 FABP3P05413 133 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 LPLP06858 475 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 TNFRSF1BP20333 461 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 POU1F1P28069 291 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 PEX2P28328 305 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 GGT2P36268 569 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 MED21Q13503 144 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 CYBRD1Q53TN4 286 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 TMEM200BQ69YZ2 307 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 KCTD18Q6PI47 426 aaPredicted RBP10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 PTCHD4Q6ZW05 846 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 C16orf82Q7Z2V1 217 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 FAM185AQ8N0U4 392 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 ZNRF1Q8ND25 227 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 OR13C2Q8NGS9 318 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 SPSB4Q96A44 273 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 ZNF570Q96NI8 536 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 PPP1R3EQ9H7J1 279 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 CYB5R1Q9UHQ9 305 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 POLR1DQ9Y2S0 133 aa10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 DYNC1H1Q14204 4646 aaKnown RBP10.82□□□□□ -0.68
VCPKMT-201ENST00000395859 PKHD1P08F94 4074 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 IGLV1-36A0A0B4J1U3 117 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 M0R135 149 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 CDC42EP2O14613 210 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 CST1P01037 141 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 SNRNP70P08621 437 aaKnown RBP10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 OR1E2P47887 323 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 SLC9A3P48764 834 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 ENTPD1P49961 510 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 SMIM11AP58511 58 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 PRKCDQ05655 676 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 KRR1Q13601 381 aaKnown RBP10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 LRRC23Q53EV4 343 aaPredicted RBP10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 IFI44LQ53G44 452 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 C9orf66Q5T8R8 295 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 ZNF770Q6IQ21 691 aaPredicted RBP10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 OAFQ86UD1 273 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 LINC00346Q8IVM7 164 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 ZDHHC21Q8IVQ6 265 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 SLC26A10Q8NG04 563 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 OR11H6Q8NGC7 330 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 SDSLQ96GA7 329 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 ZNF799Q96GE5 643 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 RAX2Q96IS3 184 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 PRRC1Q96M27 445 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 USE1Q9NZ43 259 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 ENOPH1Q9UHY7 261 aa10.81□□□□□ -0.68
VCPKMT-201ENST00000395859 GNGT2O14610 69 aa10.8□□□□□ -0.68
VCPKMT-201ENST00000395859 ZNF682O95780 498 aa10.8□□□□□ -0.68
VCPKMT-201ENST00000395859 FRMD6-AS1P0C7T7 363 aa10.8□□□□□ -0.68
VCPKMT-201ENST00000395859 CCL3L1P16619 93 aa10.8□□□□□ -0.68
VCPKMT-201ENST00000395859 TPTEP56180 551 aa10.8□□□□□ -0.68
VCPKMT-201ENST00000395859 FAM76BQ5HYJ3 339 aa10.8□□□□□ -0.68
VCPKMT-201ENST00000395859 OR2T5Q6IEZ7 315 aa10.8□□□□□ -0.68
VCPKMT-201ENST00000395859 OVCH2Q7RTZ1 564 aa10.8□□□□□ -0.68
VCPKMT-201ENST00000395859 NRMQ8IXM6 262 aa10.8□□□□□ -0.68
VCPKMT-201ENST00000395859 LINC00471Q8N535 108 aa10.8□□□□□ -0.68
VCPKMT-201ENST00000395859 CYB561A3Q8NBI2 242 aa10.8□□□□□ -0.68
VCPKMT-201ENST00000395859 OR2T29Q8NH02 315 aa10.8□□□□□ -0.68
VCPKMT-201ENST00000395859 OR8S1Q8NH09 359 aa10.8□□□□□ -0.68
VCPKMT-201ENST00000395859 TPD52L3Q96J77 140 aa10.8□□□□□ -0.68
VCPKMT-201ENST00000395859 TSSK2Q96PF2 358 aa10.8□□□□□ -0.68
VCPKMT-201ENST00000395859 PITX2Q99697 317 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms