RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 C3orf80F5H4A9 247 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 FCGR3BO75015 233 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 EPPINO95925 133 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 KRASP01116 189 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 CNN1P51911 297 aaKnown RBP9.28□□□□□ -0.92
COL4A6-203ENST00000394872 ACSM6Q6P461 480 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 MAMSTRQ6ZN01 415 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 C20orf196Q8IYI0 205 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 NPEPL1Q8NDH3 523 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 OR5D13Q8NGL4 314 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 RND1Q92730 232 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 CHRDL1Q9BU40 450 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 ZNF629Q9UEG4 869 aaPredicted RBP9.28□□□□□ -0.92
COL4A6-203ENST00000394872 A0A1B0GUH1 482 aa9.27□□□□□ -0.92
COL4A6-203ENST00000394872 G3V3Q6 166 aa9.27□□□□□ -0.92
COL4A6-203ENST00000394872 DHRS3O75911 302 aa9.27□□□□□ -0.92
COL4A6-203ENST00000394872 TOX4O94842 621 aa9.27□□□□□ -0.92
COL4A6-203ENST00000394872 FBP1P09467 338 aa9.27□□□□□ -0.92
COL4A6-203ENST00000394872 DRD3P35462 400 aa9.27□□□□□ -0.92
COL4A6-203ENST00000394872 YBX1P67809 324 aaKnown RBP9.27□□□□□ -0.92
COL4A6-203ENST00000394872 PDZK1IP1Q13113 114 aa9.27□□□□□ -0.92
COL4A6-203ENST00000394872 OR52B4Q8NGK2 314 aa9.27□□□□□ -0.92
COL4A6-203ENST00000394872 ST8SIA2Q92186 375 aa9.27□□□□□ -0.92
COL4A6-203ENST00000394872 YIPF6Q96EC8 236 aa9.27□□□□□ -0.92
COL4A6-203ENST00000394872 AMDHD2Q9Y303 409 aa9.27□□□□□ -0.92
COL4A6-203ENST00000394872 SNRPGP15A8MWD9 76 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 H3BP45 60 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 HRASP01112 189 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 CLDN20P56880 219 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 GLCCI1Q86VQ1 547 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 OR6S1Q8NH40 331 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 C4orf45Q96LM5 186 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 SMIM7Q9BQ49 75 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 VPS25Q9BRG1 176 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 CXXC4Q9H2H0 198 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 ADGRL4Q9HBW9 690 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 FBXO34Q9NWN3 711 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 TCFL5Q9UL49 500 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 PSG11Q9UQ72 335 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 DNASE2O00115 360 aaPredicted RBP9.27□□□□□ -0.93
COL4A6-203ENST00000394872 SLC17A2O00624 439 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 FUCA1P04066 466 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 HOXC8P31273 242 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 LIMK1P53667 647 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 KISS1Q15726 138 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 RAB1CQ92928 201 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 TSPAN32Q96QS1 320 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 TOX3O15405 576 aaPredicted RBP9.27□□□□□ -0.93
COL4A6-203ENST00000394872 ZNF17P17021 662 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 TRAT1Q6PIZ9 186 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 TMPRSS11FQ6ZWK6 438 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 OR5M8Q8NGP6 311 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 TMEM147Q9BVK8 224 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 ICAM5Q9UMF0 924 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 SIGLEC7Q9Y286 467 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 TTC3P53804 2025 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 LIMS3P0CW19 117 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 LIMS4P0CW20 117 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 WDR38Q5JTN6 314 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 FAM27D1Q5T7N8 215 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 C1orf53Q5VUE5 145 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 SIGLECL1Q8N7X8 197 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 SLC24A4Q8NFF2 622 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 DUSP21Q9H596 190 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 NIT2Q9NQR4 276 aa9.27□□□□□ -0.93
COL4A6-203ENST00000394872 MDH2P40926 338 aaKnown RBP9.26□□□□□ -0.93
COL4A6-203ENST00000394872 RAB7AP51149 207 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 C3AR1Q16581 482 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 RHBDD2Q6NTF9 364 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 RFESDQ8TAC1 157 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 DYNC2LI1Q8TCX1 351 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 ZNF230Q9UIE0 474 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-203ENST00000394872 SNCGO76070 127 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 HOXB3P14651 431 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-203ENST00000394872 CRISPLD2Q9H0B8 497 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 IGHV3-43A0A0B4J1X8 118 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 hADV38S2A0JD32 116 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 IGHV3-43DP0DP04 118 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 Q6ZNX1 250 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 LINC00299Q6ZSB3 139 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 MOB1BQ7L9L4 216 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 NUFIP2Q7Z417 695 aaKnown RBP9.26□□□□□ -0.93
COL4A6-203ENST00000394872 MRGPREQ86SM8 312 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 C20orf141Q9NUB4 165 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 CLEC5AQ9NY25 188 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 KLK11Q9UBX7 282 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 SCN9AQ15858 1988 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 A0A1W2PRD5 423 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 A0A1W2PRF3 423 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 A0A1W2PRM7 423 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 PLPP3O14495 311 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 TMEM267Q0VDI3 215 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-203ENST00000394872 WDR74Q6RFH5 385 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-203ENST00000394872 CADM3Q8N126 398 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 SPAARA0A1B0GVQ0 90 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 Q3ZCU0 254 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 NCR3LG1Q68D85 454 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 OR2W3Q7Z3T1 314 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 GLRX2Q9NS18 164 aa9.26□□□□□ -0.93
COL4A6-203ENST00000394872 LSM2Q9Y333 95 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms