RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ALDH3B1P43353 468 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 ACY1Q03154 408 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 SPEM2Q0P670 501 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 ECH1Q13011 328 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 PGAM5Q96HS1 289 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 TAF9BQ9HBM6 251 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 PLA2G2EQ9NZK7 142 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 B3GALT1Q9Y5Z6 326 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 IGKV1D-8A0A087WSZ0 117 aa16.08■□□□□ 0.16
PCDHA1-202ENST00000394633 STMND1H3BQB6 276 aa16.08■□□□□ 0.16
PCDHA1-202ENST00000394633 MED6O75586 246 aa16.08■□□□□ 0.16
PCDHA1-202ENST00000394633 TIAF1O95411 115 aa16.08■□□□□ 0.16
PCDHA1-202ENST00000394633 KNG1P01042 644 aa16.08■□□□□ 0.16
PCDHA1-202ENST00000394633 RBM39Q14498 530 aaKnown RBP16.08■□□□□ 0.16
PCDHA1-202ENST00000394633 NKAIN1Q4KMZ8 207 aa16.08■□□□□ 0.16
PCDHA1-202ENST00000394633 OR2A2Q6IF42 318 aa16.08■□□□□ 0.16
PCDHA1-202ENST00000394633 GHRLQ9UBU3 117 aa16.08■□□□□ 0.16
PCDHA1-202ENST00000394633 RNASEK-C17orf49H0YIS7 233 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 TAAR5O14804 337 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 HEXAP06865 529 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 ZNF84P51523 738 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 PDZK1IP1Q13113 114 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 UBE2V2Q15819 145 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 CHRFAM7AQ494W8 412 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 WDR74Q6RFH5 385 aaPredicted RBP16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 RXFP4Q8TDU9 374 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 CNTNAP3Q9BZ76 1288 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 MEMO1Q9Y316 297 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 ZNF726A6NNF4 738 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 OR2J2O76002 312 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 CER1O95813 267 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 SERPINA5P05154 406 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 CTSSP25774 331 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 THBS4P35443 961 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 SULT1A2P50226 295 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 EIF5AP63241 154 aaKnown RBP16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 CTAG1AP78358 180 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 EIF3IQ13347 325 aaKnown RBP16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 SURF2Q15527 256 aaPredicted RBP16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 TMEM268Q5VZI3 342 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 BTNL8Q6UX41 500 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 RABEPKQ7Z6M1 372 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 TM2D1Q9BX74 207 aa16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 C14orf166Q9Y224 244 aaKnown RBP16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 EP300Q09472 2414 aaPredicted RBP16.07■□□□□ 0.16
PCDHA1-202ENST00000394633 MEX3AA1L020 520 aaKnown RBP16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 IFNA2P01563 188 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 CRYBA1P05813 215 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 SFTA3P0C7M3 94 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 CCL7P80098 99 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 ZNF239Q16600 458 aaKnown RBP16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 TMEM176BQ3YBM2 270 aaPredicted RBP16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 EIF5AL1Q6IS14 154 aaKnown RBP16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 GALNTL5Q7Z4T8 443 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 OR5L2Q8NGL0 311 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 GLYATL2Q8WU03 294 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 BIN3Q9NQY0 253 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 MYOTQ9UBF9 498 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 MCTS1Q9ULC4 181 aaKnown RBP16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 CUL9Q8IWT3 2517 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 LNP1A1A4G5 178 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 AQP7P3A6NL99 342 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 SERPINE3A8MV23 424 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 C9JQL5 133 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 CD5P06127 495 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 FCGR3AP08637 254 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 SPP1P10451 314 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 FCGR2AP12318 317 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 FAHP16930 419 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 CLDN17P56750 224 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 IAH1Q2TAA2 248 aaPredicted RBP16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 DMBX1Q8NFW5 382 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 ZNF160Q9HCG1 818 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 ZNF701Q9NV72 531 aaPredicted RBP16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 C1orf123Q9NWV4 160 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 COA4Q9NYJ1 87 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 V9GYS6 101 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 CELSR3Q9NYQ7 3312 aa16.06■□□□□ 0.16
PCDHA1-202ENST00000394633 YKT6O15498 198 aa16.05■□□□□ 0.16
PCDHA1-202ENST00000394633 RBMXP38159 391 aaKnown RBP16.05■□□□□ 0.16
PCDHA1-202ENST00000394633 ID4P47928 161 aa16.05■□□□□ 0.16
PCDHA1-202ENST00000394633 AVPI1Q5T686 147 aa16.05■□□□□ 0.16
PCDHA1-202ENST00000394633 SLC16A14Q7RTX9 510 aa16.05■□□□□ 0.16
PCDHA1-202ENST00000394633 SEMA6DQ8NFY4 1073 aa16.05■□□□□ 0.16
PCDHA1-202ENST00000394633 CMSS1Q9BQ75 279 aaKnown RBP16.05■□□□□ 0.16
PCDHA1-202ENST00000394633 PCDHGA1Q9Y5H4 931 aa16.05■□□□□ 0.16
PCDHA1-202ENST00000394633 RTTNQ86VV8 2226 aa16.05■□□□□ 0.16
PCDHA1-202ENST00000394633 OR5H15A6NDH6 313 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 DHRS7CA6NNS2 312 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 F5H5K5 113 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 AGPAT2O15120 278 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 FBXO24O75426 580 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 ZFAND5O76080 213 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 CST4P01036 141 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 RPL12P30050 165 aaKnown RBP16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 PHYHD1Q5SRE7 291 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 C6orf201Q7Z4U5 140 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 CPEB2Q7Z5Q1 589 aaKnown RBP16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 WDSUB1Q8N9V3 476 aa16.04■□□□□ 0.16
PCDHA1-202ENST00000394633 PIGTQ969N2 578 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms