RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 RPS23P62266 143 aaKnown RBP9.83□□□□□ -0.84
CUX1-204ENST00000393824 RPP30P78346 268 aaKnown RBP9.83□□□□□ -0.84
CUX1-204ENST00000393824 RAB32Q13637 225 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 SLC17A1Q14916 467 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 TOMM34Q15785 309 aaPredicted RBP9.83□□□□□ -0.84
CUX1-204ENST00000393824 WBP2NLQ6ICG8 309 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 LYPD6Q86Y78 171 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 OTOSQ8NHW6 89 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 MARCH1Q8TCQ1 289 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 S100PBPQ96BU1 408 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 INTS14Q96SY0 518 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 TGIF2Q9GZN2 237 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 Q9N2J8 555 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 UBQLN4Q9NRR5 601 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 CGGBP1Q9UFW8 167 aaPredicted RBP9.83□□□□□ -0.84
CUX1-204ENST00000393824 GTF2A1LQ9UNN4 478 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 IGLV3-12A0A075B6K2 115 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 A0A087X0M5 115 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 A0A1B0GX30 115 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 MASP2O00187 686 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 F10P00742 488 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 ASAH2BP0C7U1 165 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 CRABP1P29762 137 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 THBS4P35443 961 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 NDUFA6P56556 154 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 NSDHLQ15738 373 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 POMZP3Q6PJE2 187 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 KDM8Q8N371 416 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 UBAC2Q8NBM4 344 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 POC1AQ8NBT0 407 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 OR10D4PQ8NGN7 298 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 OR51F2Q8NH61 342 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 TERB2Q8NHR7 220 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 TMEM230Q96A57 120 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 C8orf44Q96CB5 159 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 AMELYQ99218 206 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 ELOVL3Q9HB03 270 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 TAS2R4Q9NYW5 299 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 GRHPRQ9UBQ7 328 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 GDF2Q9UK05 429 aaPredicted RBP9.82□□□□□ -0.84
CUX1-204ENST00000393824 RAB22AQ9UL26 194 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 SLC22A13Q9Y226 551 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 ATMQ13315 3056 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 BLACEA4D250 179 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 TSTD3H0UI37 97 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 H7C1Q1 480 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 KLF7O75840 302 aaPredicted RBP9.82□□□□□ -0.84
CUX1-204ENST00000393824 OR2C1O95371 312 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 RPS27P42677 84 aaKnown RBP9.82□□□□□ -0.84
CUX1-204ENST00000393824 RPS10P46783 165 aaKnown RBP9.82□□□□□ -0.84
CUX1-204ENST00000393824 RAP1AP62834 184 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 FOXO1Q12778 655 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 NNATQ16517 81 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.82□□□□□ -0.844e-6■■□□□ 11.4
CUX1-204ENST00000393824 SLC22A6Q4U2R8 563 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 MIDNQ504T8 468 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 THEM4Q5T1C6 240 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 MRPL14Q6P1L8 145 aaKnown RBP9.82□□□□□ -0.84
CUX1-204ENST00000393824 CLEC18BQ6UXF7 455 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.82□□□□□ -0.84
CUX1-204ENST00000393824 ATG4DQ86TL0 474 aaPredicted RBP9.82□□□□□ -0.84
CUX1-204ENST00000393824 ZNF679Q8IYX0 411 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 ACBD4Q8NC06 268 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 MAFIPQ8WZ33 124 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 GALNT14Q96FL9 552 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 OR10C1Q96KK4 312 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 SLC35B3Q9H1N7 401 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 C5orf66Q9H5L9 145 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 PNO1Q9NRX1 252 aaKnown RBP9.82□□□□□ -0.84
CUX1-204ENST00000393824 FAM212BQ9NTI7 297 aaPredicted RBP9.82□□□□□ -0.84
CUX1-204ENST00000393824 RHBDD3Q9Y3P4 386 aa9.82□□□□□ -0.84
CUX1-204ENST00000393824 DCDC2BA2VCK2 349 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 B4E171 279 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 ZNF264O43296 627 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 PNPP00491 289 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 JMJD7P0C870 316 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 G0S2P27469 103 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 NOVA1P51513 510 aaKnown RBP9.81□□□□□ -0.84
CUX1-204ENST00000393824 RPS18P62269 152 aaKnown RBP9.81□□□□□ -0.84
CUX1-204ENST00000393824 GAMTQ14353 236 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 MEP1BQ16820 701 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 ACTBL2Q562R1 376 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 OR4N2Q8NGD1 307 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 DTD1Q8TEA8 209 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 MR1Q95460 341 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 MUCL1Q96DR8 90 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 LIN37Q96GY3 246 aaPredicted RBP9.81□□□□□ -0.84
CUX1-204ENST00000393824 SLC25A44Q96H78 314 aaPredicted RBP9.81□□□□□ -0.84
CUX1-204ENST00000393824 GNRHR2Q96P88 292 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 GPR61Q9BZJ8 451 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 SPRY4Q9C004 299 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 ARV1Q9H2C2 271 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 CRLF2Q9HC73 371 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 MMP25Q9NPA2 562 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 KCNJ16Q9NPI9 418 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 C19orf12Q9NSK7 152 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 ELOA3CA0A087WX78 387 aaPredicted RBP9.81□□□□□ -0.84
CUX1-204ENST00000393824 VSTM2BA6NLU5 285 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 C17orf105B2RV13 164 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 DANCRP0C864 163 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms