RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 RRP8O43159 456 aaKnown RBP16.49■□□□□ 0.23
CBX1-202ENST00000393408 MUC1P15941 1255 aaPredicted RBP16.49■□□□□ 0.23
CBX1-202ENST00000393408 OTX1P32242 354 aaPredicted RBP16.49■□□□□ 0.23
CBX1-202ENST00000393408 CAV2P51636 162 aa16.49■□□□□ 0.23
CBX1-202ENST00000393408 RTL6Q6ICC9 239 aa16.49■□□□□ 0.23
CBX1-202ENST00000393408 RAB11FIP2Q7L804 512 aa16.49■□□□□ 0.23
CBX1-202ENST00000393408 C6orf201Q7Z4U5 140 aa16.49■□□□□ 0.23
CBX1-202ENST00000393408 TAF9BQ9HBM6 251 aa16.49■□□□□ 0.23
CBX1-202ENST00000393408 RCC2Q9P258 522 aaKnown RBP16.49■□□□□ 0.23
CBX1-202ENST00000393408 MLXQ9UH92 298 aa16.49■□□□□ 0.23
CBX1-202ENST00000393408 MRPS17Q9Y2R5 130 aaKnown RBP16.49■□□□□ 0.23
CBX1-202ENST00000393408 IGHV5-10-1A0A0J9YXX1 117 aa16.49■□□□□ 0.23
CBX1-202ENST00000393408 DHRS7CA6NNS2 312 aa16.49■□□□□ 0.23
CBX1-202ENST00000393408 RCC1P18754 421 aaPredicted RBP16.49■□□□□ 0.23
CBX1-202ENST00000393408 RBMXP38159 391 aaKnown RBP16.49■□□□□ 0.23
CBX1-202ENST00000393408 ECI1P42126 302 aa16.49■□□□□ 0.23
CBX1-202ENST00000393408 LPAR6P43657 344 aa16.49■□□□□ 0.23
CBX1-202ENST00000393408 SPEM2Q0P670 501 aa16.49■□□□□ 0.23
CBX1-202ENST00000393408 EIF5AL1Q6IS14 154 aaKnown RBP16.49■□□□□ 0.23
CBX1-202ENST00000393408 SEMA6DQ8NFY4 1073 aa16.49■□□□□ 0.23
CBX1-202ENST00000393408 ELL3Q9HB65 397 aaPredicted RBP16.49■□□□□ 0.23
CBX1-202ENST00000393408 TP53I11O14683 189 aa16.48■□□□□ 0.23
CBX1-202ENST00000393408 PNLIPP16233 465 aa16.48■□□□□ 0.23
CBX1-202ENST00000393408 CCL7P80098 99 aa16.48■□□□□ 0.23
CBX1-202ENST00000393408 IAH1Q2TAA2 248 aaPredicted RBP16.48■□□□□ 0.23
CBX1-202ENST00000393408 FOXRED2Q8IWF2 684 aa16.48■□□□□ 0.23
CBX1-202ENST00000393408 LRRC18Q8N456 261 aa16.48■□□□□ 0.23
CBX1-202ENST00000393408 ZNF385AQ96PM9 386 aaKnown RBP16.48■□□□□ 0.23
CBX1-202ENST00000393408 AKIRIN1Q9H9L7 192 aaPredicted RBP16.48■□□□□ 0.23
CBX1-202ENST00000393408 CD63P08962 238 aa16.48■□□□□ 0.23
CBX1-202ENST00000393408 TMEM268Q5VZI3 342 aa16.48■□□□□ 0.23
CBX1-202ENST00000393408 OR2A2Q6IF42 318 aa16.48■□□□□ 0.23
CBX1-202ENST00000393408 GALNTL5Q7Z4T8 443 aa16.48■□□□□ 0.23
CBX1-202ENST00000393408 Q96M66 194 aa16.48■□□□□ 0.23
CBX1-202ENST00000393408 PIGQQ9BRB3 760 aa16.48■□□□□ 0.23
CBX1-202ENST00000393408 ZNF2Q9BSG1 426 aaPredicted RBP16.48■□□□□ 0.23
CBX1-202ENST00000393408 PCDHGA1Q9Y5H4 931 aa16.48■□□□□ 0.23
CBX1-202ENST00000393408 A0A087WZY1 265 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 MSTNO14793 375 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 MED6O75586 246 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 CTSDP07339 412 aaPredicted RBP16.47■□□□□ 0.23
CBX1-202ENST00000393408 SULT1A2P50226 295 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 RSPO4Q2I0M5 234 aaPredicted RBP16.47■□□□□ 0.23
CBX1-202ENST00000393408 SULF2Q8IWU5 870 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 TMEM123Q8N131 208 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 C10orf35Q96D05 121 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 HDHD3Q9BSH5 251 aaPredicted RBP16.47■□□□□ 0.23
CBX1-202ENST00000393408 DECR2Q9NUI1 292 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 RTTNQ86VV8 2226 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 IGHV3-15A0A0B4J1V0 119 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 M0R135 149 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 DHHO43323 396 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 MTRF1O75570 445 aaKnown RBP16.47■□□□□ 0.23
CBX1-202ENST00000393408 CST4P01036 141 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 SERPINA5P05154 406 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 DBHP09172 617 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 GABRR1P24046 479 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 RPL12P30050 165 aaKnown RBP16.47■□□□□ 0.23
CBX1-202ENST00000393408 MRPL14Q6P1L8 145 aaKnown RBP16.47■□□□□ 0.23
CBX1-202ENST00000393408 SGPP2Q8IWX5 399 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 FNDC9Q8TBE3 224 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 ZNF799Q96GE5 643 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 CCDC74BQ96LY2 380 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 PLEKHJ1Q9NW61 149 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 TUBD1Q9UJT1 453 aa16.47■□□□□ 0.23
CBX1-202ENST00000393408 LY6G6EA0A0G2JKS1 128 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 NME2P22392 152 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 RFC3P40938 356 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 RPUSD3Q6P087 351 aaKnown RBP16.46■□□□□ 0.23
CBX1-202ENST00000393408 BTNL8Q6UX41 500 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 CCDC54Q8NEL0 328 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 RBM24Q9BX46 236 aaKnown RBP16.46■□□□□ 0.23
CBX1-202ENST00000393408 ZFP57Q9NU63 452 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 PLA2G2EQ9NZK7 142 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 LHX6Q9UPM6 363 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 U3KQA8 63 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 CRYM-AS1A6NIL9 109 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 RNASEK-C17orf49H0YIS7 233 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 DEDDO75618 318 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 FARS2O95363 451 aaKnown RBP16.46■□□□□ 0.23
CBX1-202ENST00000393408 CELA2AP08217 269 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 IGFBP4P22692 258 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 PCOLCEQ15113 449 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 PPP1R3BQ86XI6 285 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 CPNE2Q96FN4 548 aaPredicted RBP16.46■□□□□ 0.23
CBX1-202ENST00000393408 UCN2Q96RP3 112 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 ANXA10Q9UJ72 324 aa16.46■□□□□ 0.23
CBX1-202ENST00000393408 NPIPA2E9PIF3 369 aa16.45■□□□□ 0.22
CBX1-202ENST00000393408 NPIPA3F8WFD2 350 aa16.45■□□□□ 0.22
CBX1-202ENST00000393408 K7EPK0 472 aa16.45■□□□□ 0.22
CBX1-202ENST00000393408 APOC1P02654 83 aa16.45■□□□□ 0.22
CBX1-202ENST00000393408 HEXAP06865 529 aa16.45■□□□□ 0.22
CBX1-202ENST00000393408 SNAI3Q3KNW1 292 aa16.45■□□□□ 0.22
CBX1-202ENST00000393408 SPEM1Q8N4L4 309 aa16.45■□□□□ 0.22
CBX1-202ENST00000393408 FAM71E2Q8N5Q1 922 aa16.45■□□□□ 0.22
CBX1-202ENST00000393408 OR9K2Q8NGE7 335 aa16.45■□□□□ 0.22
CBX1-202ENST00000393408 GPR173Q9NS66 373 aa16.45■□□□□ 0.22
CBX1-202ENST00000393408 FBXL17Q9UF56 701 aa16.45■□□□□ 0.22
CBX1-202ENST00000393408 EIF1BO60739 113 aaKnown RBP16.45■□□□□ 0.22
CBX1-202ENST00000393408 VAMP5O95183 116 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms