RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ZNF750Q32MQ0 723 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 HIKESHIQ53FT3 197 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 CSNK1A1LQ8N752 337 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 NKAIN3Q8N8D7 197 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 APCDD1LQ8NCL9 501 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 OR2AE1Q8NHA4 323 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 OR14C36Q8NHC7 312 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 CLUHP3Q96NS8 147 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 SLC5A7Q9GZV3 580 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 KIAA1456Q9P272 454 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 A0A1B0GTI1 187 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 CCL25O15444 150 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 SLC25A17O43808 307 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 LEFTY1O75610 366 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 SFT2D2O95562 160 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 ATP1B2P14415 290 aaPredicted RBP6.82□□□□□ -1.32
VTI1A-201ENST00000393077 HLA-GP17693 338 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 EMP2P54851 167 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 BSXQ3C1V8 233 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 PLEKHS1Q5SXH7 462 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 ZNF787Q6DD87 383 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 LGI3Q8N145 548 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 OR5D18Q8NGL1 313 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 ABHD5Q8WTS1 349 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 ASB11Q8WXH4 323 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 KLF16Q9BXK1 252 aaPredicted RBP6.82□□□□□ -1.32
VTI1A-201ENST00000393077 DUSP15Q9H1R2 295 aaPredicted RBP6.82□□□□□ -1.32
VTI1A-201ENST00000393077 PRSS16Q9NQE7 514 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 CENPMQ9NSP4 180 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 P4HTMQ9NXG6 502 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 SERTAD3Q9UJW9 196 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 TIMM8BQ9Y5J9 83 aaPredicted RBP6.82□□□□□ -1.32
VTI1A-201ENST00000393077 CBR3O75828 277 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 SEMA4FO95754 770 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 APODP05090 189 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 OR10J4P0C629 311 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 ALOX5APP20292 161 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 HOXD9P28356 352 aaPredicted RBP6.82□□□□□ -1.32
VTI1A-201ENST00000393077 ASCL1P50553 236 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 RND3P61587 244 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 ZNF85Q03923 595 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 KCTD18Q6PI47 426 aaPredicted RBP6.82□□□□□ -1.32
VTI1A-201ENST00000393077 CPEB2Q7Z5Q1 589 aaKnown RBP6.82□□□□□ -1.32
VTI1A-201ENST00000393077 ST6GALNAC3Q8NDV1 305 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 NUP43Q8NFH3 380 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 OR9A4Q8NGU2 314 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 ZNF48Q96MX3 618 aaPredicted RBP6.82□□□□□ -1.32
VTI1A-201ENST00000393077 TNFRSF13CQ96RJ3 184 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 PCGF1Q9BSM1 259 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 LRFN3Q9BTN0 628 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 DMRT3Q9NQL9 472 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 CLDND1Q9NY35 253 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 APOBEC3BQ9UH17 382 aaKnown RBP6.82□□□□□ -1.32
VTI1A-201ENST00000393077 B3GALT5Q9Y2C3 310 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 A0A1W2PRS3 328 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 HAND1O96004 215 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 DANCRP0C864 163 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 CRISP2P16562 243 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 USF1P22415 310 aaPredicted RBP6.82□□□□□ -1.32
VTI1A-201ENST00000393077 TMEM267Q0VDI3 215 aaPredicted RBP6.82□□□□□ -1.32
VTI1A-201ENST00000393077 DUSP8Q13202 625 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 MSMO1Q15800 293 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 SPIN3Q5JUX0 258 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 MEX3BQ6ZN04 569 aaKnown RBP6.82□□□□□ -1.32
VTI1A-201ENST00000393077 ADAD2Q8NCV1 583 aaKnown RBP6.82□□□□□ -1.32
VTI1A-201ENST00000393077 OR4D11Q8NGI4 311 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 OR2Y1Q8NGV0 311 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 MS4A6EQ96DS6 147 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 SYT3Q9BQG1 590 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 SLC17A5Q9NRA2 495 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 SLC39A9Q9NUM3 307 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 NTNG1Q9Y2I2 539 aa6.82□□□□□ -1.32
VTI1A-201ENST00000393077 TRAV39A0A0B4J263 110 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 OR4C45A6NMZ5 311 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 VSTM5A8MXK1 200 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 HYAL3O43820 417 aaPredicted RBP6.81□□□□□ -1.32
VTI1A-201ENST00000393077 CYC1P08574 325 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 HMGA1P17096 107 aaKnown RBP6.81□□□□□ -1.32
VTI1A-201ENST00000393077 FBXW4P57775 412 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 PPP1CBP62140 327 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 SMAGPQ0VAQ4 97 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 ALG10Q5BKT4 473 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 ALG10BQ5I7T1 473 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 FAM71E1Q6IPT2 247 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 MOB1BQ7L9L4 216 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 MORN4Q8NDC4 146 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 OR4N2Q8NGD1 307 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 WBP2Q969T9 261 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 TMEM186Q96B77 213 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 PGLYRP3Q96LB9 341 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 SPIN2AQ99865 258 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 SPIN2BQ9BPZ2 258 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 ADGRL4Q9HBW9 690 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 IL26Q9NPH9 171 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 PLSCR2Q9NRY7 297 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 PRSS50Q9UI38 385 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 YBX2Q9Y2T7 364 aaKnown RBP6.81□□□□□ -1.32
VTI1A-201ENST00000393077 TRAV30A0A087WSZ9 112 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 MDFIC2A0A1B0GVS7 189 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 SERTM2A0A1B0GWG4 89 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms