RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 MICBQ29980 383 aa11.55□□□□□ -0.56
PTPRN2-202ENST00000389416 OR10AD1Q8NGE0 317 aa11.55□□□□□ -0.56
PTPRN2-202ENST00000389416 SLC25A31Q9H0C2 315 aa11.55□□□□□ -0.56
PTPRN2-202ENST00000389416 PLEKHA3Q9HB20 300 aa11.55□□□□□ -0.56
PTPRN2-202ENST00000389416 ASF1BQ9NVP2 202 aa11.55□□□□□ -0.56
PTPRN2-202ENST00000389416 TINAGQ9UJW2 476 aa11.55□□□□□ -0.56
PTPRN2-202ENST00000389416 MYO7BQ6PIF6 2116 aa11.55□□□□□ -0.56
PTPRN2-202ENST00000389416 HEXAP06865 529 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 ZFP36L1Q07352 338 aaKnown RBP11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 FAM214BQ7L5A3 538 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 SSX9Q7RTT3 188 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 NUFIP2Q7Z417 695 aaKnown RBP11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 C6orf201Q7Z4U5 140 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 SHISA5Q8N114 240 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 FAM58AQ8N1B3 248 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 ESRP2Q9H6T0 727 aaKnown RBP11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 HEYLQ9NQ87 328 aaPredicted RBP11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 TMEM272A0A1B0GTI8 110 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 APOC3P02656 99 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 UMODP07911 640 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 ATF4P18848 351 aaPredicted RBP11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 IL3RAP26951 378 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 CADM3Q8N126 398 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 FAAP24Q9BTP7 215 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 FN3KRPQ9HA64 309 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 TAAR3PQ9P1P4 343 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 MS4A18H0YCH9 400 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 CHRNB4P30926 498 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 ECI1P42126 302 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 MMP16P51512 607 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 RPP30P78346 268 aaKnown RBP11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 DYRK1AQ13627 763 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 MS4A18Q3C1V0 323 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 TMEM217Q8N7C4 229 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 TINAGL1Q9GZM7 467 aaPredicted RBP11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 ZNF230Q9UIE0 474 aaPredicted RBP11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 A0A0B4J2A0 478 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 LRP3O75074 770 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 TPT1P13693 172 aaKnown RBP11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 TNFAIP6P98066 277 aaPredicted RBP11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 MDP1Q86V88 176 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 OR2AK2Q8NG84 335 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 IMMP1LQ96LU5 166 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 ZNF285Q96NJ3 590 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 ZNF355PQ9NSJ1 428 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 SHPKQ9UHJ6 478 aa11.54□□□□□ -0.56
PTPRN2-202ENST00000389416 PKDREJQ9NTG1 2253 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 TRAV8-7A0A075B6U6 113 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 ABCD4O14678 606 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 ETV6P41212 452 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 GPR12P47775 334 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 GK2Q14410 553 aaPredicted RBP11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 CLINT1Q14677 625 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 LRRTM1Q86UE6 522 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 WDSUB1Q8N9V3 476 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 HGDQ93099 445 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 ARL11Q969Q4 196 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 TMEM68Q96MH6 324 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 SDHAF2Q9NX18 166 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 CHCHD2Q9Y6H1 151 aaPredicted RBP11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 C16orf97H3BN30 126 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 SULT1C2O00338 296 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 CD3EP07766 207 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 CATSPERDQ86XM0 798 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 OR5T1Q8NG75 326 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 OR10X1Q8NGY0 326 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 LRRC29Q8WV35 223 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 FYTTD1Q96QD9 318 aaKnown RBP11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 AMELYQ99218 206 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 NMNAT2Q9BZQ4 307 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 TREM2Q9NZC2 230 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 SIRT4Q9Y6E7 314 aaPredicted RBP11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 PRR19A6NJB7 356 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 NANOS3P60323 173 aaKnown RBP11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 BTG1P62324 171 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 RPL19P84098 196 aaKnown RBP11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 EGR4Q05215 589 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 FAM27BQ5VT28 67 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 ASB5Q8WWX0 329 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 RIMS4Q9H426 269 aaPredicted RBP11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 MMP15P51511 669 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 HLXQ14774 488 aaPredicted RBP11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 PDLIM3Q53GG5 364 aaPredicted RBP11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 ZNF767PQ75MW2 155 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 C17orf82Q86X59 251 aaPredicted RBP11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 HAS2Q92819 552 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 FBXW5Q969U6 566 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 TSNAXQ99598 290 aaKnown RBP11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 CHST6Q9GZX3 395 aa11.53□□□□□ -0.56
PTPRN2-202ENST00000389416 IGLV3-12A0A075B6K2 115 aa11.52□□□□□ -0.56
PTPRN2-202ENST00000389416 POM121CA8CG34 1229 aa11.52□□□□□ -0.56
PTPRN2-202ENST00000389416 ZNF205O95201 554 aa11.52□□□□□ -0.56
PTPRN2-202ENST00000389416 CELA3AP09093 270 aa11.52□□□□□ -0.56
PTPRN2-202ENST00000389416 HOXA1P49639 335 aaPredicted RBP11.52□□□□□ -0.56
PTPRN2-202ENST00000389416 IRF3Q14653 427 aa11.52□□□□□ -0.56
PTPRN2-202ENST00000389416 KCNJ8Q15842 424 aa11.52□□□□□ -0.56
PTPRN2-202ENST00000389416 TMEM200AQ86VY9 491 aa11.52□□□□□ -0.56
PTPRN2-202ENST00000389416 OR8U1Q8NH10 309 aa11.52□□□□□ -0.56
PTPRN2-202ENST00000389416 ST7LQ8TDW4 575 aa11.52□□□□□ -0.56
PTPRN2-202ENST00000389416 UPRTQ96BW1 309 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms