RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 LANCL3Q6ZV70 420 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 MRPL24Q96A35 216 aaKnown RBP11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 PLA2G2FQ9BZM2 168 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 ST3GAL6Q9Y274 331 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 SCN10AQ9Y5Y9 1956 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 A0A1W2PP11 408 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 ECH1Q13011 328 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 VN1R1Q9GZP7 353 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 ABI3Q9P2A4 366 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 PAPPA2Q9BXP8 1791 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 C1QL1O75973 258 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 BCKDHBP21953 392 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 RRADP55042 308 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 INSM1Q01101 510 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 TMEM74BQ9NUR3 256 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 ANKRD10Q9NXR5 420 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 LAMP3Q9UQV4 416 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 IAPPP10997 89 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 GPR3P46089 330 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 LIMK1P53667 647 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 TGIF1Q15583 401 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 ZNF787Q6DD87 383 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 FBXL14Q8N1E6 418 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 OR6C1Q96RD1 312 aa11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 DICER1Q9UPY3 1922 aaKnown RBP11.68□□□□□ -0.54
TRAPPC9-201ENST00000389328 MYLKQ15746 1914 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 CCDC187A0A096LP49 1063 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 TRBV5-7A0A0A0MS05 114 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 A0A1W2PPQ1 181 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 ALG1L2C9J202 215 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 MYBPHQ13203 477 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 SPANXN5Q5MJ07 72 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 SMIM7Q9BQ49 75 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 KLF15Q9UIH9 416 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 OTOFQ9HC10 1997 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 H3BMH7 237 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 TUSC2O75896 110 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 MLF1P58340 268 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 BAXQ07812 192 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 MGAT2Q10469 447 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 PHOSPHO2Q8TCD6 241 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 LHX4Q969G2 390 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 INTS12Q96CB8 462 aaKnown RBP11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 GCM1Q9NP62 436 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 PILRAQ9UKJ1 303 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 IGHV5-51A0A0C4DH38 117 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 YKT6O15498 198 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 TAS2R30P59541 319 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 RNF4P78317 190 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 NAAAQ02083 359 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 IL22RA1Q8N6P7 574 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 ZSCAN4Q8NAM6 433 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 MRPL38Q96DV4 380 aaKnown RBP11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 MFRPQ9BY79 579 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 ZNF107Q9UII5 783 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 TRAPPC2LQ9UL33 140 aa11.67□□□□□ -0.54
TRAPPC9-201ENST00000389328 HS3ST1O14792 307 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 ACTL6AO96019 429 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 COL9A1P20849 921 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 RPS4Y1P22090 263 aaKnown RBP11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 G0S2P27469 103 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 LPAR6P43657 344 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 HFEQ30201 348 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 MAML2Q8IZL2 1156 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 OR5C1Q8NGR4 320 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 LIPGQ9Y5X9 500 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 ANKRD36A6QL64 1941 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 OR6C6A6NF89 314 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 ANKRD30BLA7E2S9 258 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 J3QRE1 110 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 NRASP01111 189 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 ASAH2BP0C7U1 165 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 MYF5P13349 255 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 PSMB3P49720 205 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 NKAIN1Q4KMZ8 207 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 TMEM240Q5SV17 173 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 ZNF813Q6ZN06 617 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 POMT1Q9Y6A1 747 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 SLCO1B1Q9Y6L6 691 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 TRAV14DV4A0A0A6YYC5 116 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 TNFSF14O43557 240 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 EDN3P14138 238 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 EIF1P41567 113 aaKnown RBP11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 PCBD1P61457 104 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 H3F3AP84243 136 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 SLC25A26Q70HW3 274 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 SPRED2Q7Z698 418 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 ZNF383Q8NA42 475 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 OR8B12Q8NGG6 310 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 OR2AE1Q8NHA4 323 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 RDH5Q92781 318 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 TP53BP1Q12888 1972 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 SPTY2D1-AS1A0A0U1RR47 76 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 F10P00742 488 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 SHBQ15464 509 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 NOXO1Q8NFA2 376 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 OR1N1Q8NGS0 311 aa11.66□□□□□ -0.54
TRAPPC9-201ENST00000389328 ADAM11O75078 769 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 CD63P08962 238 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms