RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 HSD11B1P28845 292 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 PTGER4P35408 488 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 MFGE8Q08431 387 aaPredicted RBP10.83□□□□□ -0.68
CIITA-202ENST00000381835 HSPB2Q16082 182 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 C2orf76Q3KRA6 126 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 DEGS2Q6QHC5 323 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 PRSS35Q8N3Z0 413 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 RELL2Q8NC24 303 aaPredicted RBP10.83□□□□□ -0.68
CIITA-202ENST00000381835 PXT1Q8NFP0 134 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 MBD3L2Q8NHZ7 208 aaPredicted RBP10.83□□□□□ -0.68
CIITA-202ENST00000381835 PPP1R14AQ96A00 147 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 ATG5Q9H1Y0 275 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 POFUT1Q9H488 388 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 PNRC2Q9NPJ4 139 aaKnown RBP10.83□□□□□ -0.68
CIITA-202ENST00000381835 PLEK2Q9NYT0 353 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 DUX4Q9UBX2 424 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 TMEM269A0A1B0GVZ9 245 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 IL2RAP01589 272 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 CST2P09228 141 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 ZNF32P17041 273 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 PRKACAP17612 351 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 MPGP29372 298 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 PRKXP51817 358 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 RAB11BQ15907 218 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 WDR38Q5JTN6 314 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 ABHD12BQ7Z5M8 362 aaPredicted RBP10.83□□□□□ -0.68
CIITA-202ENST00000381835 DOLPP1Q86YN1 238 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 FGFBP3Q8TAT2 258 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 CCDC107Q8WV48 283 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 ASB13Q8WXK3 278 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 MRPS24Q96EL2 167 aaKnown RBP10.83□□□□□ -0.68
CIITA-202ENST00000381835 SLC25A32Q9H2D1 315 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 KCNK15Q9H427 330 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 TINAGQ9UJW2 476 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 SLC22A13Q9Y226 551 aa10.83□□□□□ -0.68
CIITA-202ENST00000381835 DOK2O60496 412 aa10.82□□□□□ -0.68
CIITA-202ENST00000381835 ITGA5P08648 1049 aa10.82□□□□□ -0.68
CIITA-202ENST00000381835 TMED4Q7Z7H5 227 aa10.82□□□□□ -0.68
CIITA-202ENST00000381835 BIVMQ86UB2 503 aa10.82□□□□□ -0.68
CIITA-202ENST00000381835 ZNF546Q86UE3 836 aa10.82□□□□□ -0.68
CIITA-202ENST00000381835 FAM3DQ96BQ1 224 aa10.82□□□□□ -0.68
CIITA-202ENST00000381835 C4orf45Q96LM5 186 aa10.82□□□□□ -0.68
CIITA-202ENST00000381835 IFT46Q9NQC8 304 aa10.82□□□□□ -0.68
CIITA-202ENST00000381835 R4GMQ9 66 aa10.82□□□□□ -0.68
CIITA-202ENST00000381835 LOC100289279A0A1B0GTE1 492 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 SGCEO43556 437 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 TNFSF13O75888 250 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 OR4E1P0C645 316 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 UBBP0CG47 229 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 UBCP0CG48 685 aaKnown RBP10.81□□□□□ -0.68
CIITA-202ENST00000381835 MGMTP16455 207 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 KIR3DL2P43630 455 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 ACTBP60709 375 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 RPS27AP62979 156 aaKnown RBP10.81□□□□□ -0.68
CIITA-202ENST00000381835 UBA52P62987 128 aaKnown RBP10.81□□□□□ -0.68
CIITA-202ENST00000381835 ACTG1P63261 375 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 CACNA1BQ00975 2339 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 ATRAIDQ6UW56 229 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 RHOUQ7L0Q8 258 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 GABRG1Q8N1C3 465 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 C12orf45Q8N5I9 185 aaPredicted RBP10.81□□□□□ -0.68
CIITA-202ENST00000381835 NAXEQ8NCW5 288 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 OR10K1Q8NGX5 313 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 AKR7LQ8NHP1 331 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 ALX4Q9H161 411 aaPredicted RBP10.81□□□□□ -0.68
CIITA-202ENST00000381835 SHANK1Q9Y566 2161 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 MYO7BQ6PIF6 2116 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 SMG1Q96Q15 3661 aaKnown RBP10.81□□□□□ -0.68
CIITA-202ENST00000381835 TRAV14DV4A0A0A6YYC5 116 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 TMEM82A0PJX8 343 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 F5H5K5 113 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 H3BUI4 141 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 IL18BPO95998 194 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 SLC2A1P11166 492 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 SFTPCP11686 197 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 ACHEP22303 614 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 TAS2R19P59542 299 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 HIST1H3AP68431 136 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 SCRN3Q0VDG4 424 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 STK11Q15831 433 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 NRN1LQ496H8 165 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 HIST2H3PS2Q5TEC6 136 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 ZNF774Q6NX45 483 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 FDX2Q6P4F2 183 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 HIST2H3AQ71DI3 136 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 CATSPERDQ86XM0 798 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 ST8SIA2Q92186 375 aa10.81□□□□□ -0.68
CIITA-202ENST00000381835 A0A0D9SG52 128 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 SLC17A2O00624 439 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 SRSF10O75494 262 aaKnown RBP10.8□□□□□ -0.68
CIITA-202ENST00000381835 RAB3DO95716 219 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 HLA-HP01893 362 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 TIMP3P35625 211 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 PCBD1P61457 104 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 GRB2P62993 217 aaKnown RBP10.8□□□□□ -0.68
CIITA-202ENST00000381835 PSG4Q00888 419 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 DEFA5Q01523 94 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 SSBP1Q04837 148 aaKnown RBP10.8□□□□□ -0.68
CIITA-202ENST00000381835 RBPJQ06330 500 aa10.8□□□□□ -0.68
CIITA-202ENST00000381835 C17orf107Q6ZR85 190 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms