RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 CHD3Q12873 2000 aaKnown RBP16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 PLXNA2O75051 1894 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 PRKNO60260 465 aaPredicted RBP16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 ATP6V0CP27449 155 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 CTHP32929 405 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 ELLP55199 621 aaPredicted RBP16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 PLAC9Q5JTB6 97 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 FBXW12Q6X9E4 464 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 ZNF573Q86YE8 665 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 LINC00346Q8IVM7 164 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 DNAJC4Q9NNZ3 241 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 MMP25Q9NPA2 562 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 GNG13Q9P2W3 67 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 MPZL1O95297 269 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 H2BFMP0C1H6 154 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 HIST1H1DP16402 221 aaKnown RBP16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 CD82P27701 267 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 TLE4Q04727 773 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 LDLRAD1Q5T700 205 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 CPEB2Q7Z5Q1 589 aaKnown RBP16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 CPEB3Q8NE35 698 aaKnown RBP16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 SLC26A10Q8NG04 563 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 TOMM40LQ969M1 308 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 RCC1LQ96I51 464 aaKnown RBP16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 C5orf34Q96MH7 638 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 SPAG17Q6Q759 2223 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 FANCMQ8IYD8 2048 aa16.78■□□□□ 0.28
SMARCD1-201ENST00000381513 A0A1B0GW64 132 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 ZFP92A6NM28 416 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 NRG2O14511 850 aaPredicted RBP16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 SPINT1O43278 529 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 RAD51DO75771 328 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 BPNT1O95861 308 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 CST5P28325 142 aaPredicted RBP16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 ZNF93P35789 620 aaPredicted RBP16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 BTG2P78543 158 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 OR2L8Q8NGY9 312 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 GPER1Q99527 375 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 TNFSF12O43508 249 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 ERVS71-1P61550 626 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 RAB35Q15286 201 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 SPSB3Q6PJ21 355 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 TMEM52Q8NDY8 209 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 STT3BQ8TCJ2 826 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 C22orf15Q8WYQ4 148 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 IRF7Q92985 503 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 ARRDC3Q96B67 414 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 KTI12Q96EK9 354 aaPredicted RBP16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 SLC46A2Q9BY10 475 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 VN1R1Q9GZP7 353 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 SLC5A6Q9Y289 635 aa16.77■□□□□ 0.28
SMARCD1-201ENST00000381513 PSG6Q00889 435 aa16.77■□□□□ 0.27
SMARCD1-201ENST00000381513 RNF151Q2KHN1 245 aa16.77■□□□□ 0.27
SMARCD1-201ENST00000381513 CDCP2Q5VXM1 449 aa16.77■□□□□ 0.27
SMARCD1-201ENST00000381513 SPRED2Q7Z698 418 aa16.77■□□□□ 0.27
SMARCD1-201ENST00000381513 GPR119Q8TDV5 335 aa16.77■□□□□ 0.27
SMARCD1-201ENST00000381513 SRPK3Q9UPE1 567 aa16.77■□□□□ 0.27
SMARCD1-201ENST00000381513 SPACA6W5XKT8 324 aa16.77■□□□□ 0.27
SMARCD1-201ENST00000381513 SLC33A1O00400 549 aaPredicted RBP16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 HSPB1P04792 205 aaKnown RBP16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 PRSS41Q7RTY9 318 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 RNF144BQ7Z419 303 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 C11orf42Q8N5U0 333 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 VN1R3Q9BXE9 311 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 OR51B6Q9H340 312 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 SCN10AQ9Y5Y9 1956 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 FREM3P0C091 2139 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 FOLR1P15328 257 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 WNT5AP41221 380 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 SGCGQ13326 291 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 PRICKLE4Q2TBC4 344 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 C1orf194Q5T5A4 169 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 FBXO46Q6PJ61 603 aaPredicted RBP16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 LRRC75AQ8NAA5 344 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 TMEM59Q9BXS4 323 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 LPAR5Q9H1C0 372 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 VAX2Q9UIW0 290 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 TUBD1Q9UJT1 453 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 OSGIN2Q9Y236 505 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 B3GALT1Q9Y5Z6 326 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 DOCK9Q9BZ29 2069 aa16.76■□□□□ 0.27
SMARCD1-201ENST00000381513 CCDC163A0A0D9SF12 145 aa16.75■□□□□ 0.27
SMARCD1-201ENST00000381513 PPP5D1E7EU14 171 aa16.75■□□□□ 0.27
SMARCD1-201ENST00000381513 NKX2-2O95096 273 aa16.75■□□□□ 0.27
SMARCD1-201ENST00000381513 OPN1MWP04001 364 aa16.75■□□□□ 0.27
SMARCD1-201ENST00000381513 OPN1MW2P0DN77 364 aa16.75■□□□□ 0.27
SMARCD1-201ENST00000381513 OPN1MW3P0DN78 364 aa16.75■□□□□ 0.27
SMARCD1-201ENST00000381513 LMO1P25800 156 aa16.75■□□□□ 0.27
SMARCD1-201ENST00000381513 C1orf140Q5VVS0 124 aa16.75■□□□□ 0.27
SMARCD1-201ENST00000381513 SSX7Q7RTT5 188 aa16.75■□□□□ 0.27
SMARCD1-201ENST00000381513 SPACA7Q96KW9 195 aa16.75■□□□□ 0.27
SMARCD1-201ENST00000381513 SERINC2Q96SA4 455 aa16.75■□□□□ 0.27
SMARCD1-201ENST00000381513 ZNF2Q9BSG1 426 aaPredicted RBP16.75■□□□□ 0.27
SMARCD1-201ENST00000381513 R4GMQ9 66 aa16.75■□□□□ 0.27
SMARCD1-201ENST00000381513 B4DEV8 164 aa16.75■□□□□ 0.27
SMARCD1-201ENST00000381513 GPR75O95800 540 aa16.75■□□□□ 0.27
SMARCD1-201ENST00000381513 CYB5R3P00387 301 aaPredicted RBP16.75■□□□□ 0.27
SMARCD1-201ENST00000381513 GNMTQ14749 295 aa16.75■□□□□ 0.27
SMARCD1-201ENST00000381513 GPR157Q5UAW9 335 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms