RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 DMKNQ6E0U4 476 aaPredicted RBP12.35□□□□□ -0.43
VCX3B-201ENST00000381029 ASPHD2Q6ICH7 369 aa12.35□□□□□ -0.43
VCX3B-201ENST00000381029 DCDC5Q6ZRR9 648 aa12.35□□□□□ -0.43
VCX3B-201ENST00000381029 AHSA2Q719I0 299 aa12.35□□□□□ -0.43
VCX3B-201ENST00000381029 KLHL36Q8N4N3 616 aa12.35□□□□□ -0.43
VCX3B-201ENST00000381029 HAVCR2Q8TDQ0 301 aa12.35□□□□□ -0.43
VCX3B-201ENST00000381029 AQP3Q92482 292 aa12.35□□□□□ -0.43
VCX3B-201ENST00000381029 TMEM186Q96B77 213 aa12.35□□□□□ -0.43
VCX3B-201ENST00000381029 DUSP21Q9H596 190 aa12.35□□□□□ -0.43
VCX3B-201ENST00000381029 BABAM2Q9NXR7 383 aa12.35□□□□□ -0.43
VCX3B-201ENST00000381029 UBAP1Q9NZ09 502 aa12.35□□□□□ -0.43
VCX3B-201ENST00000381029 CTSZQ9UBR2 303 aa12.35□□□□□ -0.43
VCX3B-201ENST00000381029 RAB26Q9ULW5 256 aa12.35□□□□□ -0.43
VCX3B-201ENST00000381029 HHLA2Q9UM44 414 aa12.35□□□□□ -0.43
VCX3B-201ENST00000381029 PPIAL4CA0A0B4J2A2 164 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 CDK1P06493 297 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 CCDC159P0C7I6 412 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 IRF2P14316 349 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 ZNF12P17014 697 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 HSPA13P48723 471 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 GBX2P52951 348 aaPredicted RBP12.34□□□□□ -0.43
VCX3B-201ENST00000381029 IRF3Q14653 427 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 SFRP4Q6FHJ7 346 aaPredicted RBP12.34□□□□□ -0.43
VCX3B-201ENST00000381029 RPL22L1Q6P5R6 122 aaKnown RBP12.34□□□□□ -0.43
VCX3B-201ENST00000381029 C1orf229Q6ZS94 237 aaPredicted RBP12.34□□□□□ -0.43
VCX3B-201ENST00000381029 UTS2BQ765I0 119 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 CALHM1Q8IU99 346 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 NANOGP1Q8N7R0 232 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 OR51F2Q8NH61 342 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 FGGYQ96C11 551 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 PGLYRP3Q96LB9 341 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 CDCA4Q9BXL8 241 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 WDR13Q9H1Z4 485 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 LPAR2Q9HBW0 351 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 HIF1ANQ9NWT6 349 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 ERVK-18Q9QC07 812 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 LSM2Q9Y333 95 aaKnown RBP12.34□□□□□ -0.43
VCX3B-201ENST00000381029 WNK2Q9Y3S1 2297 aa12.34□□□□□ -0.43
VCX3B-201ENST00000381029 TRAV20A0A0B4J274 112 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 TRAPPC2LH3BP13 241 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 SYNGR1O43759 233 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 NOS1APO75052 506 aaPredicted RBP12.33□□□□□ -0.44
VCX3B-201ENST00000381029 AVPP01185 164 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 MUC1P15941 1255 aaPredicted RBP12.33□□□□□ -0.44
VCX3B-201ENST00000381029 MYL12AP19105 171 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 RPS11P62280 158 aaKnown RBP eCLIP12.33□□□□□ -0.44
VCX3B-201ENST00000381029 ZNF529Q6P280 563 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 TMPRSS11AQ6ZMR5 421 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 PARP16Q8N5Y8 322 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 ZNF676Q8N7Q3 588 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 DEFB108BQ8NET1 73 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 GATAD2BQ8WXI9 593 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 PP6455Q8WZ26 134 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 POM121Q96HA1 1249 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 HIST1H2AAQ96QV6 131 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 KAAG1Q9UBP8 84 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 MIOXQ9UGB7 285 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 KCNS2Q9ULS6 477 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 LRCH1Q9Y2L9 728 aa12.33□□□□□ -0.44
VCX3B-201ENST00000381029 IGHV3OR15-7A0A075B7D8 119 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 TRAV38-1A0A0B4J264 116 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 TRBV2A0A0J9YWF9 115 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 hCG_1807616A0A1W2PRN6 198 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 J3QT63 122 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 AKR7A2O43488 359 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 ALX3O95076 343 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 MT-ND2P03891 347 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 ACAA1P09110 424 aaPredicted RBP12.32□□□□□ -0.44
VCX3B-201ENST00000381029 PGA5P0DJD9 388 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 CRHBPP24387 322 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 ERVK11-1P61568 191 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 CR1LQ2VPA4 569 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 FAM120AOSQ5T036 256 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 ATPAF1Q5TC12 328 aaPredicted RBP12.32□□□□□ -0.44
VCX3B-201ENST00000381029 STUMQ69YW2 141 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 HAGHLQ6PII5 290 aaPredicted RBP12.32□□□□□ -0.44
VCX3B-201ENST00000381029 KCTD8Q6ZWB6 473 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 RNF144BQ7Z419 303 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 GLCCI1Q86VQ1 547 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 ZNF573Q86YE8 665 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 BOLLQ8N9W6 283 aaKnown RBP12.32□□□□□ -0.44
VCX3B-201ENST00000381029 POC1AQ8NBT0 407 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 DNAAF1Q8NEP3 725 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 OR5AK2Q8NH90 309 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 C12orf43Q96C57 262 aaKnown RBP12.32□□□□□ -0.44
VCX3B-201ENST00000381029 SMIM19Q96E16 107 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 NEIL1Q96FI4 390 aaPredicted RBP12.32□□□□□ -0.44
VCX3B-201ENST00000381029 TMPRSS13Q9BYE2 586 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 PLEKHA1Q9HB21 404 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 HES4Q9HCC6 221 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 SMURF1Q9HCE7 757 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 MMP26Q9NRE1 261 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 ZNF222Q9UK12 451 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 PCDHB10Q9UN67 800 aa12.32□□□□□ -0.44
VCX3B-201ENST00000381029 CUBNO60494 3623 aa12.31□□□□□ -0.44
VCX3B-201ENST00000381029 A0A1B0GW55 424 aa12.31□□□□□ -0.44
VCX3B-201ENST00000381029 PHF1O43189 567 aaPredicted RBP12.31□□□□□ -0.44
VCX3B-201ENST00000381029 NDUFA2O43678 99 aa12.31□□□□□ -0.44
VCX3B-201ENST00000381029 FOXH1O75593 365 aa12.31□□□□□ -0.44
VCX3B-201ENST00000381029 GATBO75879 557 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms