RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 PHB2Q99623 299 aa18.78■□□□□ 0.6
TRIM54-202ENST00000380075 ZNF703Q9H7S9 590 aaPredicted RBP18.78■□□□□ 0.6
TRIM54-202ENST00000380075 GPR35Q9HC97 309 aa18.78■□□□□ 0.6
TRIM54-202ENST00000380075 NCOA6Q14686 2063 aaPredicted RBP18.78■□□□□ 0.6
TRIM54-202ENST00000380075 A0A1W2PP11 408 aa18.77■□□□□ 0.6
TRIM54-202ENST00000380075 C9orf170A2RU37 121 aa18.77■□□□□ 0.6
TRIM54-202ENST00000380075 CFDP00746 253 aaPredicted RBP18.77■□□□□ 0.6
TRIM54-202ENST00000380075 ZNF32P17041 273 aa18.77■□□□□ 0.6
TRIM54-202ENST00000380075 PRKACBP22694 351 aa18.77■□□□□ 0.6
TRIM54-202ENST00000380075 ARFRP1Q13795 201 aa18.77■□□□□ 0.6
TRIM54-202ENST00000380075 CNN3Q15417 329 aaKnown RBP18.77■□□□□ 0.6
TRIM54-202ENST00000380075 CEACAM16Q2WEN9 425 aa18.77■□□□□ 0.6
TRIM54-202ENST00000380075 SPINK14Q6IE38 97 aa18.77■□□□□ 0.6
TRIM54-202ENST00000380075 ZNF774Q6NX45 483 aa18.77■□□□□ 0.6
TRIM54-202ENST00000380075 TERB2Q8NHR7 220 aa18.77■□□□□ 0.6
TRIM54-202ENST00000380075 FBXW5Q969U6 566 aa18.77■□□□□ 0.6
TRIM54-202ENST00000380075 REEP6Q96HR9 211 aa18.77■□□□□ 0.6
TRIM54-202ENST00000380075 ARGFXA6NJG6 315 aa18.77■□□□□ 0.59
TRIM54-202ENST00000380075 OR2AT4A6NND4 320 aa18.77■□□□□ 0.59
TRIM54-202ENST00000380075 PMP2P02689 132 aa18.77■□□□□ 0.59
TRIM54-202ENST00000380075 B4GALT1P15291 398 aa18.77■□□□□ 0.59
TRIM54-202ENST00000380075 MICBQ29980 383 aa18.77■□□□□ 0.59
TRIM54-202ENST00000380075 C17orf107Q6ZR85 190 aa18.77■□□□□ 0.59
TRIM54-202ENST00000380075 NPRL2Q8WTW4 380 aa18.77■□□□□ 0.59
TRIM54-202ENST00000380075 LINC00470Q9BZP3 86 aa18.77■□□□□ 0.59
TRIM54-202ENST00000380075 CDK2AP1O14519 115 aa18.76■□□□□ 0.59
TRIM54-202ENST00000380075 FARS2O95363 451 aaKnown RBP18.76■□□□□ 0.59
TRIM54-202ENST00000380075 HTR5AP47898 357 aa18.76■□□□□ 0.59
TRIM54-202ENST00000380075 TAS2R46P59540 309 aa18.76■□□□□ 0.59
TRIM54-202ENST00000380075 IL13RA1P78552 427 aa18.76■□□□□ 0.59
TRIM54-202ENST00000380075 PPP1R1AQ13522 171 aa18.76■□□□□ 0.59
TRIM54-202ENST00000380075 HLXQ14774 488 aaPredicted RBP18.76■□□□□ 0.59
TRIM54-202ENST00000380075 DCAF10Q5QP82 559 aa18.76■□□□□ 0.59
TRIM54-202ENST00000380075 TMEM65Q6PI78 240 aa18.76■□□□□ 0.59
TRIM54-202ENST00000380075 C1QL2Q7Z5L3 287 aa18.76■□□□□ 0.59
TRIM54-202ENST00000380075 TMEM17Q86X19 198 aa18.76■□□□□ 0.59
TRIM54-202ENST00000380075 ZNF100Q8IYN0 542 aa18.76■□□□□ 0.59
TRIM54-202ENST00000380075 OR5D18Q8NGL1 313 aa18.76■□□□□ 0.59
TRIM54-202ENST00000380075 ANGPTL6Q8NI99 470 aa18.76■□□□□ 0.59
TRIM54-202ENST00000380075 OR2H1Q9GZK4 316 aa18.76■□□□□ 0.59
TRIM54-202ENST00000380075 ATPIF1Q9UII2 106 aa18.76■□□□□ 0.59
TRIM54-202ENST00000380075 KIF25Q9UIL4 384 aa18.76■□□□□ 0.59
TRIM54-202ENST00000380075 PTPRQQ9UMZ3 2332 aa18.76■□□□□ 0.59
TRIM54-202ENST00000380075 RAD51DO75771 328 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 DUS4LO95620 317 aaKnown RBP18.75■□□□□ 0.59
TRIM54-202ENST00000380075 BLVRBP30043 206 aaPredicted RBP18.75■□□□□ 0.59
TRIM54-202ENST00000380075 SORDQ00796 357 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 AIMP2Q13155 320 aaKnown RBP18.75■□□□□ 0.59
TRIM54-202ENST00000380075 NHLRC3Q5JS37 347 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 GALNTL5Q7Z4T8 443 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 OR5H2Q8NGV7 314 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 ST8SIA4Q92187 359 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 B3GALNT1O75752 331 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 LCATP04180 440 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 SERPINA2P20848 420 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 PSG4Q00888 419 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 RTN4RL2Q86UN3 420 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 PIGTQ969N2 578 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 FER1L6-AS2Q96M78 137 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 PECRQ9BY49 303 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 ARL6Q9H0F7 186 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 PARPBPQ9NWS1 579 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 COMMD9Q9P000 198 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 KCNMB2Q9Y691 235 aa18.75■□□□□ 0.59
TRIM54-202ENST00000380075 LOC100509620A0A075B734 347 aa18.74■□□□□ 0.59
TRIM54-202ENST00000380075 AMY2BP19961 511 aa18.74■□□□□ 0.59
TRIM54-202ENST00000380075 LHX2P50458 406 aa18.74■□□□□ 0.59
TRIM54-202ENST00000380075 SFRP5Q5T4F7 317 aa18.74■□□□□ 0.59
TRIM54-202ENST00000380075 ABHD3Q8WU67 409 aa18.74■□□□□ 0.59
TRIM54-202ENST00000380075 ZNF845Q96IR2 970 aaPredicted RBP18.74■□□□□ 0.59
TRIM54-202ENST00000380075 SIGLEC12Q96PQ1 595 aa18.74■□□□□ 0.59
TRIM54-202ENST00000380075 MFFQ9GZY8 342 aa18.74■□□□□ 0.59
TRIM54-202ENST00000380075 WNT5BQ9H1J7 359 aa18.74■□□□□ 0.59
TRIM54-202ENST00000380075 NOSIPQ9Y314 301 aaKnown RBP18.74■□□□□ 0.59
TRIM54-202ENST00000380075 NCKAP5O14513 1909 aa18.74■□□□□ 0.59
TRIM54-202ENST00000380075 TRAV14DV4A0A0A6YYC5 116 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 OR5H14A6NHG9 310 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 SLC25A4P12235 298 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 ACKR3P25106 362 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 ITGA3P26006 1051 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 OR1C1Q15619 314 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 NSUN5P2Q63ZY6 315 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 LHFPL2Q6ZUX7 228 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 TMEM185AQ8NFB2 350 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 AKR7LQ8NHP1 331 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 SLC39A7Q92504 469 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 TECTBQ96PL2 329 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 PDCD10Q9BUL8 212 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 METTL9Q9H1A3 318 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 GPR173Q9NS66 373 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 USP24Q9UPU5 2620 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 MRPL33O75394 65 aaKnown RBP18.73■□□□□ 0.59
TRIM54-202ENST00000380075 F10P00742 488 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 FPR2P25090 351 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 CALCRP30988 508 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 MTCP1P56278 107 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 HGFACQ04756 655 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 TMEM128Q5BJH2 165 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 TMEM42Q69YG0 159 aa18.73■□□□□ 0.59
TRIM54-202ENST00000380075 GSG1LQ6UXU4 331 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms