RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 ST6GAL2Q96JF0 529 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 VAMP8Q9BV40 100 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 SHBQ15464 509 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 OR4C5Q8NGB2 326 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 LINC00615Q96LM1 132 aaPredicted RBP10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 C20orf141Q9NUB4 165 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 GPR37O15354 613 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 RRASP10301 218 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 GALR1P47211 349 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 GPM6AP51674 278 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 SOX8P57073 446 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 RANP62826 216 aaKnown RBP10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 TOMM34Q15785 309 aaPredicted RBP10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 TMEM128Q5BJH2 165 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 ETFRF1Q6IPR1 90 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 TAAR6Q96RI8 345 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 AUP1Q9Y679 476 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 DLEC1Q9Y238 1755 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 ANKUB1A6NFN9 424 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 PTBP3O95758 552 aaKnown RBP10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 PEX11BO96011 259 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 SLC25A4P12235 298 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 FAHP16930 419 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 FZD2Q14332 565 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 CLPPQ16740 277 aaPredicted RBP10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 GPR32P1Q8NGA4 272 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 OR2A1Q8NGT9 310 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 FOCADQ5VW36 1801 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 GLULP15104 373 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 FAHD2BQ6P2I3 314 aaPredicted RBP10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 DRAM2Q6UX65 266 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 ST8SIA1Q92185 356 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 HGDQ93099 445 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 FAHD2AQ96GK7 314 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 NHSQ6T4R5 1651 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 OR5G3P0C626 314 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 COX7A1P24310 79 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 FKBP2P26885 142 aaKnown RBP10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 CCR2P41597 374 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 PDCD1Q15116 288 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 PNLIPRP3Q17RR3 467 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 GGNBP1Q5YKI7 109 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 ZNRF4Q8WWF5 429 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 RTN4IP1Q8WWV3 396 aaPredicted RBP10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 ADGRL4Q9HBW9 690 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 MED19A0JLT2 244 aaPredicted RBP10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 DNASE2O00115 360 aaPredicted RBP10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 DNPH1O43598 174 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 OR7C2O60412 319 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 B4GALT1P15291 398 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 MEOX2P50222 304 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 HNRNPA3P51991 378 aaKnown RBP10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 GGTLC2Q14390 218 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 ZNF628Q5EBL2 1059 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 OR2A2Q6IF42 318 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 H3BP45 60 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 CEACAM5P06731 702 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 COX5AP20674 150 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 METAP1P53582 386 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 TMEM196Q5HYL7 178 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 PRR27Q6MZM9 219 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 ZNF573Q86YE8 665 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 OTOSQ8NHW6 89 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 CMTM3Q96MX0 182 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 SCN3AQ9NY46 2000 aa10.74□□□□□ -0.69
PCDHA9-201ENST00000378122 ARPC3O15145 178 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 KCNJ3P48549 501 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 SP6Q3SY56 376 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 AMER3Q8N944 861 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 TRAF4Q9BUZ4 470 aaPredicted RBP10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 TEX101Q9BY14 249 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 PLAC1Q9HBJ0 212 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 KIF13BQ9NQT8 1826 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 C9orf170A2RU37 121 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 SLC17A2O00624 439 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 FPR2P25090 351 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 RTL8BQ17RB0 113 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 WDR38Q5JTN6 314 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 S1PR3Q99500 378 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 ZGLP1P0C6A0 271 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 PMCHP20382 165 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 LIMK1P53667 647 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 PPP1CBP62140 327 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 BTNL3Q6UXE8 466 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 SLC25A26Q70HW3 274 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 SPICQ8N5J4 248 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 FAM24BQ8N5W8 94 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 FGF11Q92914 225 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 KCNK15Q9H427 330 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 POLDIP2Q9Y2S7 368 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 PPM1DO15297 605 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 V9GYH0 126 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 GPR31O00270 319 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 CST7O76096 145 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 MVDP53602 400 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 TAS2R45P59539 299 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 TOMM20LQ6UXN7 152 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 CASP8AP2Q9UKL3 1982 aa10.73□□□□□ -0.69
PCDHA9-201ENST00000378122 SEZ6L2Q6UXD5 910 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 LSMEM1Q8N8F7 131 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms